Click here to switch to the map view.

The map label for this gene is 39997428

Identifier: 39997428

GI number: 39997428

Start: 2549738

End: 2550154

Strand: Direct

Name: 39997428

Synonym: GSU2331

Alternate gene names: NA

Gene position: 2549738-2550154 (Clockwise)

Preceding gene: 39997427

Following gene: 39997429

Centisome position: 66.85

GC content: 66.43

Gene sequence:

>417_bases
ATGACTCACGGTCTCCTTGTCTTTCTCGCGCTCCTCCCCTTCTTCCTCCTGCTGGACTACCTCTGGCTCGGCCGCCTCAT
GCGGGGGTTCTACCTGCGGGAACTGGGGGACCTGGCCCGGAGTGAAGGAGACGCCATCAAACCGCGCCTCCTGGCTGCGG
CCGGGGTCTACCTGGCCCTGCCGGGAGGGATCGTCCTCTTCGCCCTCCCCCGGGTTGACCCGGCCCGTCCGCTGGTCTCG
GCCCTCGGCTGGGGATTTCTTTACGGTCTCGTGGTCTACGGCGTCTATGATCTCACCAACCGCGCCACCCTCAGCGAGTG
GCCCCTCAGGATGGCGACCGTCGACATCTGCTGGGGCGGCTTACTCTGCGCCGTCAGCACCCTGATCGCAGCACTCCTTG
ACCCCCTTCTCCCCTGA

Upstream 100 bases:

>100_bases
AGGCGCTGCCGACCACCGGGGCCATGCTGATCCTGGCTGCCGGCTGGGGAGTCATGACTCCGCTGCTGGTCGGGGCGGCA
AACTATTTCCGGAGGCAGCC

Downstream 100 bases:

>100_bases
GATGGAATCGTTCCCTTCAGAGCCACGGCTTTGACCTGTAAGCCATAAGCCTTGAGGTCATTACCCCGATGAACTATAGT
CAGCAAACCAACATAGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTHGLLVFLALLPFFLLLDYLWLGRLMRGFYLRELGDLARSEGDAIKPRLLAAAGVYLALPGGIVLFALPRVDPARPLVS
ALGWGFLYGLVVYGVYDLTNRATLSEWPLRMATVDICWGGLLCAVSTLIAALLDPLLP

Sequences:

>Translated_138_residues
MTHGLLVFLALLPFFLLLDYLWLGRLMRGFYLRELGDLARSEGDAIKPRLLAAAGVYLALPGGIVLFALPRVDPARPLVS
ALGWGFLYGLVVYGVYDLTNRATLSEWPLRMATVDICWGGLLCAVSTLIAALLDPLLP
>Mature_137_residues
THGLLVFLALLPFFLLLDYLWLGRLMRGFYLRELGDLARSEGDAIKPRLLAAAGVYLALPGGIVLFALPRVDPARPLVSA
LGWGFLYGLVVYGVYDLTNRATLSEWPLRMATVDICWGGLLCAVSTLIAALLDPLLP

Specific function: Unknown

COG id: COG4852

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15087; Mature: 14956

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHGLLVFLALLPFFLLLDYLWLGRLMRGFYLRELGDLARSEGDAIKPRLLAAAGVYLAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PGGIVLFALPRVDPARPLVSALGWGFLYGLVVYGVYDLTNRATLSEWPLRMATVDICWGG
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
LLCAVSTLIAALLDPLLP
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
THGLLVFLALLPFFLLLDYLWLGRLMRGFYLRELGDLARSEGDAIKPRLLAAAGVYLAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PGGIVLFALPRVDPARPLVSALGWGFLYGLVVYGVYDLTNRATLSEWPLRMATVDICWGG
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
LLCAVSTLIAALLDPLLP
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA