Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is senX3 [H]
Identifier: 39997287
GI number: 39997287
Start: 2400056
End: 2401243
Strand: Direct
Name: senX3 [H]
Synonym: GSU2189
Alternate gene names: 39997287
Gene position: 2400056-2401243 (Clockwise)
Preceding gene: 39997281
Following gene: 39997297
Centisome position: 62.93
GC content: 62.12
Gene sequence:
>1188_bases ATGCTACCGGTGGCCGACGACATGAAACACTCTCAGACCGAGACTACTCCAACCAGCCATTTCGCGCCGGCCGAACGTGC CTCTGACCGCCAAGTGGCGGAGATGGGCGGACGGGTTCTCGTGGACCGCGTACTCGGTGCACTGATCGAGGCATTGCCCG ACTACATCCTCGTCCTGAACCGGGAACGTCAGGTCGTGGCGGCCAACCAGCGACTCCTCGAGGCCTTTGGCCTCACGGAC ATGGGTGCAATTATGGGCAAACGCCCCGGCGAAGCCTTCGGCTGTACGTTCGCCTCGGACGGCCCCGGCGGGTGTGGCAC CGATCACCACTGCTCGGTCTGCGGAGCGGTCCGGTCGATCCTGGAATGCCAGGAGAACAATGCCCCCAGCAGGCATGAGT GCCGCATTACCCTCAATCGCTCGGGTGGGCTTTCCCTTGACCTGGAAGTGCTCTCCAATCCGGCCCAGGTGGACGGCATC CCCGTCACGGTCTGCATCATCCGCGACATCAGCGACCGCAAGCGGCGCACCATCCTGGAACGGGTGTTTTTCCACGATGT CATCAATACGGTGGGAGGCCTGCACGGCATCGCCGCGCTGCTGGCCGAAGGGAAAGGGATCTCGCCGGAGAAGGAAGCCG AGTACAAAGAATGGATGGTGCACCTGTCGAACCGTCTCATCGACGAAATCAACCACCACCGCAAGCTGCTTGCCGCCGAG AAGGGAGAATTCCGGCCCGACCTGGGCATGGTGGACGTGCAGCAACTGGCGCGCGAGGTTCAGGCCTTGTACGTGAACCA CGACATTGCTCAGGGACGCAGACTTGTGCTCGGTCCCCTAGCGGAACTGACCATCGTGAGCGATCTCCAGATCCTGCGGC GCATTCTCGGCAATCTGGTCAAAAACGCCCTTGAAGCGACACCCGAGGGAGGAACCGTCACCATTGCCGCGCGCCAGGAA GGGGACGGGGTCAGCTTCACCGTTCACAATCCGGGCCTGATTCCGCCAGAGGTCCAGTTGCAGATCTTCCAGCGCTCTTT CAGCACCAAGGAGGGCACCGGCCGCGGTATCGGCACTTACAGCGTCCGCCTCTTCGGCGAACGCTACCTGAAGGGTACCA TCACCTTTACGAGCACCGAGCGCGAAGGCACCACCTTTACCGCCAGCTTCCCCAGACAGATATCCTGA
Upstream 100 bases:
>100_bases GTTTTGAAGATAATAGCACAGGGTGTAAACGGCTCAATTATTGTATATCAATATCAACTCACCCGTTGACGCAATCATGC AGAACCGCTAGAGTGGAGCG
Downstream 100 bases:
>100_bases GCCCGCTCACCCGAGCCGCTCTTCCAGCCGGCGAAAATATTCCCCGCGGCACCAGTTCTCCACGGACACCAGGGCCCGGA ACGCGTCGGCAAAGTCCGTC
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MLPVADDMKHSQTETTPTSHFAPAERASDRQVAEMGGRVLVDRVLGALIEALPDYILVLNRERQVVAANQRLLEAFGLTD MGAIMGKRPGEAFGCTFASDGPGGCGTDHHCSVCGAVRSILECQENNAPSRHECRITLNRSGGLSLDLEVLSNPAQVDGI PVTVCIIRDISDRKRRTILERVFFHDVINTVGGLHGIAALLAEGKGISPEKEAEYKEWMVHLSNRLIDEINHHRKLLAAE KGEFRPDLGMVDVQQLAREVQALYVNHDIAQGRRLVLGPLAELTIVSDLQILRRILGNLVKNALEATPEGGTVTIAARQE GDGVSFTVHNPGLIPPEVQLQIFQRSFSTKEGTGRGIGTYSVRLFGERYLKGTITFTSTEREGTTFTASFPRQIS
Sequences:
>Translated_395_residues MLPVADDMKHSQTETTPTSHFAPAERASDRQVAEMGGRVLVDRVLGALIEALPDYILVLNRERQVVAANQRLLEAFGLTD MGAIMGKRPGEAFGCTFASDGPGGCGTDHHCSVCGAVRSILECQENNAPSRHECRITLNRSGGLSLDLEVLSNPAQVDGI PVTVCIIRDISDRKRRTILERVFFHDVINTVGGLHGIAALLAEGKGISPEKEAEYKEWMVHLSNRLIDEINHHRKLLAAE KGEFRPDLGMVDVQQLAREVQALYVNHDIAQGRRLVLGPLAELTIVSDLQILRRILGNLVKNALEATPEGGTVTIAARQE GDGVSFTVHNPGLIPPEVQLQIFQRSFSTKEGTGRGIGTYSVRLFGERYLKGTITFTSTEREGTTFTASFPRQIS >Mature_395_residues MLPVADDMKHSQTETTPTSHFAPAERASDRQVAEMGGRVLVDRVLGALIEALPDYILVLNRERQVVAANQRLLEAFGLTD MGAIMGKRPGEAFGCTFASDGPGGCGTDHHCSVCGAVRSILECQENNAPSRHECRITLNRSGGLSLDLEVLSNPAQVDGI PVTVCIIRDISDRKRRTILERVFFHDVINTVGGLHGIAALLAEGKGISPEKEAEYKEWMVHLSNRLIDEINHHRKLLAAE KGEFRPDLGMVDVQQLAREVQALYVNHDIAQGRRLVLGPLAELTIVSDLQILRRILGNLVKNALEATPEGGTVTIAARQE GDGVSFTVHNPGLIPPEVQLQIFQRSFSTKEGTGRGIGTYSVRLFGERYLKGTITFTSTEREGTTFTASFPRQIS
Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=244, Percent_Identity=26.6393442622951, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 43178; Mature: 43178
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPVADDMKHSQTETTPTSHFAPAERASDRQVAEMGGRVLVDRVLGALIEALPDYILVLN CCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEC RERQVVAANQRLLEAFGLTDMGAIMGKRPGEAFGCTFASDGPGGCGTDHHCSVCGAVRSI CCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH LECQENNAPSRHECRITLNRSGGLSLDLEVLSNPAQVDGIPVTVCIIRDISDRKRRTILE HHHHHCCCCCCEEEEEEEECCCCCEEEHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHH RVFFHDVINTVGGLHGIAALLAEGKGISPEKEAEYKEWMVHLSNRLIDEINHHRKLLAAE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGEFRPDLGMVDVQQLAREVQALYVNHDIAQGRRLVLGPLAELTIVSDLQILRRILGNLV CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHH KNALEATPEGGTVTIAARQEGDGVSFTVHNPGLIPPEVQLQIFQRSFSTKEGTGRGIGTY HHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEE SVRLFGERYLKGTITFTSTEREGTTFTASFPRQIS EEEEEEEEHEEEEEEEEECCCCCCEEEECCCCCCC >Mature Secondary Structure MLPVADDMKHSQTETTPTSHFAPAERASDRQVAEMGGRVLVDRVLGALIEALPDYILVLN CCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEC RERQVVAANQRLLEAFGLTDMGAIMGKRPGEAFGCTFASDGPGGCGTDHHCSVCGAVRSI CCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH LECQENNAPSRHECRITLNRSGGLSLDLEVLSNPAQVDGIPVTVCIIRDISDRKRRTILE HHHHHCCCCCCEEEEEEEECCCCCEEEHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHH RVFFHDVINTVGGLHGIAALLAEGKGISPEKEAEYKEWMVHLSNRLIDEINHHRKLLAAE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGEFRPDLGMVDVQQLAREVQALYVNHDIAQGRRLVLGPLAELTIVSDLQILRRILGNLV CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHH KNALEATPEGGTVTIAARQEGDGVSFTVHNPGLIPPEVQLQIFQRSFSTKEGTGRGIGTY HHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEE SVRLFGERYLKGTITFTSTEREGTTFTASFPRQIS EEEEEEEEHEEEEEEEEECCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA