Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997281
Identifier: 39997281
GI number: 39997281
Start: 2391848
End: 2393323
Strand: Direct
Name: 39997281
Synonym: GSU2183
Alternate gene names: NA
Gene position: 2391848-2393323 (Clockwise)
Preceding gene: 39997280
Following gene: 39997287
Centisome position: 62.71
GC content: 51.42
Gene sequence:
>1476_bases ATGGCGCTTAACTTGAAAAAATTACCGATCCTGTTCCTCTCAGATTCGACAACATCAGTTGCGATCAGCCGTGAAGCGAA GGCCGGGCGCATCAGGAAGATCGGACCACGTCTCTATACGTCCAACACCAGTGACGATCCGGCATATATCATTCGGCAAA ACTGGCTGCAGGCGTTGACATTACTATTTCCGGGCTGTGTCGTCAGCAACCGGACAGCACTCGAAAGCCGGGTTTCCCCT GCTGGCCGCGTGTATGTAACCGGTGACTATGCTCGAACTCTCGAATTGCATGGGACAAAATTCGTTCAGGTTAAAGGGTC TCCACCGGTAGAAGGTGATACCCCATTGTTAGGCATTTTCATGGCATCGCGTGCACGCGCCTTGCTGGAAAACCTGACGC CCTCCAGGGAGCGAAGCGGCGGTGAACTGAAGAACCTCCCCAGGGAAATGATCGAACGTCGGCTTGCCGAATTGTTGAAC GTCGAGAAGGAGGACTCTGTCAACCGACTGCGAGACCAGGCCCGCCAGATTGCTCCGCTGTTGGGGCTGGAGAAGGAGTT CGACGAACTGGACGACCTTATCGGGACGTTATTGAGAACCCGCAAGGCAACTCTTGCTGATCCGGTAGCCAAGGCGCATC AGTTGGGTACACCGTATGATCCCCATGCGTTGGAGAGGGTTGAAACGCTCTGGTCAGTCCTTGCGTCGATGCCACATAAC TATCGGCCTACAAACGCCGGAACCGGAACCCCATTTTATACCGTTTCCTTCTTTGATGCGTACTTTTCAAATTATATTGA GGGTACTCGGTTCAAGGTCGATGAGGCAAAGGAAATTGTCGACTCGGGAGTGATCCCTGCAATACGTCCGGCAGATGGCC ATGACATTCTTGGAACCTATCGAGTCGTCAGCAGCTTGGAGAATATGAGGAGAACGCCCAAGAATCCTGATGAGTTTATC GAGCTGCTGCAATCAAGACATGCTGACATCATGGTGGGGAGACCGGACAAGCGACCGGGTGAATTCAAGGAAGAAGTGAA TTATGCTGGCGCCACGCGTTTTGTTGACCCGGATCTGGTAAGAGGAACTTTGTCTCAAGGTTTCAGCTTGTATAAGTCAC TTGAACACCCTTTCGCTAGGGCACTGTTGATTATGTTTCTCGTTGCTGAAGTACACCCGTTTGACGATGGCAATGGCAGG GCAGCGCGGGCAATGATGAATTCCGAGTTGATTACCGCAGAAGAAACACGCATCATCATTCCCTCGGTTTTCAGGAATGA GTATGTGGCTTCGCTCAAGAGGATGACCAATCACTTGCAACCTGAGTCATTCATCAGCGTGATGTCGTTTGCTCAGGAGT TTGTATCCAGGATTTCATTCGACAGTTATGCCTCAGCACGGGTACAAATGGAAGGGTGCAATGCCTTCGATGATCCGGCA GATGACAAGAGATTGCTTCAACCGAGCATTTCCTGA
Upstream 100 bases:
>100_bases TTCACTCCAAGCGATAACTCCACAAAAACAACTTTAACTTTATAAATATTGCATTACGTGGTATGTATTTTCAAGAAACT GACAATTCATGGGGATACCG
Downstream 100 bases:
>100_bases ATCCAAAGAAACAGACAAGAATATTTCTTAGATAACCGTGACATAGAAATTTATGTTTATTAGCAATATGTTACGCAGAT TACGGATGCAAAAACGGATG
Product: fic family protein
Products: NA
Alternate protein names: Fic Family Protein; Fic Protein Family; Fic Domain-Containing Protein; Filamentation Induced By Camp Protein Fic
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MALNLKKLPILFLSDSTTSVAISREAKAGRIRKIGPRLYTSNTSDDPAYIIRQNWLQALTLLFPGCVVSNRTALESRVSP AGRVYVTGDYARTLELHGTKFVQVKGSPPVEGDTPLLGIFMASRARALLENLTPSRERSGGELKNLPREMIERRLAELLN VEKEDSVNRLRDQARQIAPLLGLEKEFDELDDLIGTLLRTRKATLADPVAKAHQLGTPYDPHALERVETLWSVLASMPHN YRPTNAGTGTPFYTVSFFDAYFSNYIEGTRFKVDEAKEIVDSGVIPAIRPADGHDILGTYRVVSSLENMRRTPKNPDEFI ELLQSRHADIMVGRPDKRPGEFKEEVNYAGATRFVDPDLVRGTLSQGFSLYKSLEHPFARALLIMFLVAEVHPFDDGNGR AARAMMNSELITAEETRIIIPSVFRNEYVASLKRMTNHLQPESFISVMSFAQEFVSRISFDSYASARVQMEGCNAFDDPA DDKRLLQPSIS
Sequences:
>Translated_491_residues MALNLKKLPILFLSDSTTSVAISREAKAGRIRKIGPRLYTSNTSDDPAYIIRQNWLQALTLLFPGCVVSNRTALESRVSP AGRVYVTGDYARTLELHGTKFVQVKGSPPVEGDTPLLGIFMASRARALLENLTPSRERSGGELKNLPREMIERRLAELLN VEKEDSVNRLRDQARQIAPLLGLEKEFDELDDLIGTLLRTRKATLADPVAKAHQLGTPYDPHALERVETLWSVLASMPHN YRPTNAGTGTPFYTVSFFDAYFSNYIEGTRFKVDEAKEIVDSGVIPAIRPADGHDILGTYRVVSSLENMRRTPKNPDEFI ELLQSRHADIMVGRPDKRPGEFKEEVNYAGATRFVDPDLVRGTLSQGFSLYKSLEHPFARALLIMFLVAEVHPFDDGNGR AARAMMNSELITAEETRIIIPSVFRNEYVASLKRMTNHLQPESFISVMSFAQEFVSRISFDSYASARVQMEGCNAFDDPA DDKRLLQPSIS >Mature_490_residues ALNLKKLPILFLSDSTTSVAISREAKAGRIRKIGPRLYTSNTSDDPAYIIRQNWLQALTLLFPGCVVSNRTALESRVSPA GRVYVTGDYARTLELHGTKFVQVKGSPPVEGDTPLLGIFMASRARALLENLTPSRERSGGELKNLPREMIERRLAELLNV EKEDSVNRLRDQARQIAPLLGLEKEFDELDDLIGTLLRTRKATLADPVAKAHQLGTPYDPHALERVETLWSVLASMPHNY RPTNAGTGTPFYTVSFFDAYFSNYIEGTRFKVDEAKEIVDSGVIPAIRPADGHDILGTYRVVSSLENMRRTPKNPDEFIE LLQSRHADIMVGRPDKRPGEFKEEVNYAGATRFVDPDLVRGTLSQGFSLYKSLEHPFARALLIMFLVAEVHPFDDGNGRA ARAMMNSELITAEETRIIIPSVFRNEYVASLKRMTNHLQPESFISVMSFAQEFVSRISFDSYASARVQMEGCNAFDDPAD DKRLLQPSIS
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54968; Mature: 54837
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNLKKLPILFLSDSTTSVAISREAKAGRIRKIGPRLYTSNTSDDPAYIIRQNWLQALT CCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHH LLFPGCVVSNRTALESRVSPAGRVYVTGDYARTLELHGTKFVQVKGSPPVEGDTPLLGIF HHHCCHHCCCCHHHHHHCCCCCEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCHHHHH MASRARALLENLTPSRERSGGELKNLPREMIERRLAELLNVEKEDSVNRLRDQARQIAPL HHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LGLEKEFDELDDLIGTLLRTRKATLADPVAKAHQLGTPYDPHALERVETLWSVLASMPHN HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC YRPTNAGTGTPFYTVSFFDAYFSNYIEGTRFKVDEAKEIVDSGVIPAIRPADGHDILGTY CCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHH RVVSSLENMRRTPKNPDEFIELLQSRHADIMVGRPDKRPGEFKEEVNYAGATRFVDPDLV HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCHHHH RGTLSQGFSLYKSLEHPFARALLIMFLVAEVHPFDDGNGRAARAMMNSELITAEETRIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEECCCCEEEC PSVFRNEYVASLKRMTNHLQPESFISVMSFAQEFVSRISFDSYASARVQMEGCNAFDDPA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHCCEEEECCCCCCCCCC DDKRLLQPSIS CCHHHCCCCCC >Mature Secondary Structure ALNLKKLPILFLSDSTTSVAISREAKAGRIRKIGPRLYTSNTSDDPAYIIRQNWLQALT CCCCCCCCEEEEECCCCEEEEECCCCCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHH LLFPGCVVSNRTALESRVSPAGRVYVTGDYARTLELHGTKFVQVKGSPPVEGDTPLLGIF HHHCCHHCCCCHHHHHHCCCCCEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCHHHHH MASRARALLENLTPSRERSGGELKNLPREMIERRLAELLNVEKEDSVNRLRDQARQIAPL HHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LGLEKEFDELDDLIGTLLRTRKATLADPVAKAHQLGTPYDPHALERVETLWSVLASMPHN HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC YRPTNAGTGTPFYTVSFFDAYFSNYIEGTRFKVDEAKEIVDSGVIPAIRPADGHDILGTY CCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHH RVVSSLENMRRTPKNPDEFIELLQSRHADIMVGRPDKRPGEFKEEVNYAGATRFVDPDLV HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCHHHH RGTLSQGFSLYKSLEHPFARALLIMFLVAEVHPFDDGNGRAARAMMNSELITAEETRIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEECCCCEEEC PSVFRNEYVASLKRMTNHLQPESFISVMSFAQEFVSRISFDSYASARVQMEGCNAFDDPA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHCCEEEECCCCCCCCCC DDKRLLQPSIS CCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA