Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997221
Identifier: 39997221
GI number: 39997221
Start: 2342182
End: 2343495
Strand: Direct
Name: 39997221
Synonym: GSU2123
Alternate gene names: NA
Gene position: 2342182-2343495 (Clockwise)
Preceding gene: 39997220
Following gene: 39997222
Centisome position: 61.41
GC content: 52.05
Gene sequence:
>1314_bases GTGGCCAAGCTGGCCGAGTTGAGCCACCTCTGGAAAGACCGTGAGGTACAAATAAAAGACGCAGCAAATCTCTGGAGGGA ACAGTCCCAGGAGAACAACTCTGCTACGCCTCGCCCATCATTTACCCATACAGAAATCGAGCGGTTTTTCAGCGAAATGA TCGAACACCGCTCATCAATCAATGGAATCCGCAGAGACCTGATAATCTGGCTGCTCAATCTGCTCGACAAGGAGGGTGAC TGCCCATCCGTTGTCAGGAAACACAAAGACGAGGCTGAACGGATCTATTCGGAGGATTCGTATGCCATGCTTGAGGCAGT TCCGCTCTACCGCCATACACTGACAGTGGCCCGCAACTTCATTGCCAAGGCTGACCAGGAGGCTTTGCTGGCGGATATTA TCCTCATTGCCCTGGCCCATGACATCGGCAAGATCCCCTCGTATCACGACGGCATGTACAGCAGCGGCGACCATCCGATC ATTGCCGGGCTCATCCTGAATGGAATACCGGAATTCGTTTCCCTCCCGAATAAGGAGGATATTCTTCGTGCCGTGACCGG TCACCATCTGATGAAGAGCGACAACATCCTGACGGATGGTCTCAAACAGAGCGATCATGAGGCACGCCAGTCCGAACTGT CAGCACTTTATTTGAAGATGCGGGAGCAAAAGAACAGACGCACTGAAAACGGCGTTGACACGCAGTTCGCCGCGGAAGAA ATGGAACCCACGTTCGCCAGACCAGCAACAACAGAACTTCCATCGGCAGAACGGGCAGACCCGCTCGGATTTGCTCTCGC CAAGGAGAAGTACACACCACAGCTGATAAATATCCCGGAATGCATTGATCCCGATGCAGTAATCGAGTCGCTGAAAAACA GGATAAATGTGGTTGAGTCCACCCCAAAAGGTGATCAGTGGTCTGTGGTTTCCATGCCCAACGGAGTGATCTATGTCAAC CCCGATGCACTCTGGGAAACCATCAAGGAAGTCAGCAATTATGATCCCTTGGTTTATGCCTCGGAAGGCTTCGAGGCGGA GAAACGGAATCTGATGCACTCCGTTATCACGGAGTTGGCCAGAACCAAGCAGGCCCTGGCAACCGAATACGTGGCGGACG GGTACTACACATCGAAGGTTTCCATCATTACCGGAGGAGGCAAACGACTATCCCATCTACTGATTCCCCTCACTGCTCAG TCGTTCGGCGTAACAGCGTCTGAACTGGAAGAACAGAAATCAGCGCAACTGAAGAGAATGGTTAAAGATATCAAGCATAA GAACAAGGAGGTGGAACAATGCGTTGGCCGTTGA
Upstream 100 bases:
>100_bases AGGAATATCAGCAACTGTCGGAATCGGCTTTGCTATTTATGGGACAAGGAAATGGCTGCCAAAGGAAACTCCTGAACCAC AAGAGGAGAAACAGTTTGAG
Downstream 100 bases:
>100_bases TGGCTGCGGCAATGCTCTCGCTGTCAGTATCCGCCTCTGCAAGCTACTACACCGATTCTGCCACTGGATGGTGGTGGTAC CAGAAGGAACCGGAGAAGCA
Product: HD domain-containing protein
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase HD Sub Domain; Metal Dependent Phosphohydrolases; Metal Dependent Phosphohydrolase
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MAKLAELSHLWKDREVQIKDAANLWREQSQENNSATPRPSFTHTEIERFFSEMIEHRSSINGIRRDLIIWLLNLLDKEGD CPSVVRKHKDEAERIYSEDSYAMLEAVPLYRHTLTVARNFIAKADQEALLADIILIALAHDIGKIPSYHDGMYSSGDHPI IAGLILNGIPEFVSLPNKEDILRAVTGHHLMKSDNILTDGLKQSDHEARQSELSALYLKMREQKNRRTENGVDTQFAAEE MEPTFARPATTELPSAERADPLGFALAKEKYTPQLINIPECIDPDAVIESLKNRINVVESTPKGDQWSVVSMPNGVIYVN PDALWETIKEVSNYDPLVYASEGFEAEKRNLMHSVITELARTKQALATEYVADGYYTSKVSIITGGGKRLSHLLIPLTAQ SFGVTASELEEQKSAQLKRMVKDIKHKNKEVEQCVGR
Sequences:
>Translated_437_residues MAKLAELSHLWKDREVQIKDAANLWREQSQENNSATPRPSFTHTEIERFFSEMIEHRSSINGIRRDLIIWLLNLLDKEGD CPSVVRKHKDEAERIYSEDSYAMLEAVPLYRHTLTVARNFIAKADQEALLADIILIALAHDIGKIPSYHDGMYSSGDHPI IAGLILNGIPEFVSLPNKEDILRAVTGHHLMKSDNILTDGLKQSDHEARQSELSALYLKMREQKNRRTENGVDTQFAAEE MEPTFARPATTELPSAERADPLGFALAKEKYTPQLINIPECIDPDAVIESLKNRINVVESTPKGDQWSVVSMPNGVIYVN PDALWETIKEVSNYDPLVYASEGFEAEKRNLMHSVITELARTKQALATEYVADGYYTSKVSIITGGGKRLSHLLIPLTAQ SFGVTASELEEQKSAQLKRMVKDIKHKNKEVEQCVGR >Mature_436_residues AKLAELSHLWKDREVQIKDAANLWREQSQENNSATPRPSFTHTEIERFFSEMIEHRSSINGIRRDLIIWLLNLLDKEGDC PSVVRKHKDEAERIYSEDSYAMLEAVPLYRHTLTVARNFIAKADQEALLADIILIALAHDIGKIPSYHDGMYSSGDHPII AGLILNGIPEFVSLPNKEDILRAVTGHHLMKSDNILTDGLKQSDHEARQSELSALYLKMREQKNRRTENGVDTQFAAEEM EPTFARPATTELPSAERADPLGFALAKEKYTPQLINIPECIDPDAVIESLKNRINVVESTPKGDQWSVVSMPNGVIYVNP DALWETIKEVSNYDPLVYASEGFEAEKRNLMHSVITELARTKQALATEYVADGYYTSKVSIITGGGKRLSHLLIPLTAQS FGVTASELEEQKSAQLKRMVKDIKHKNKEVEQCVGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49230; Mature: 49099
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLAELSHLWKDREVQIKDAANLWREQSQENNSATPRPSFTHTEIERFFSEMIEHRSSI CCHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH NGIRRDLIIWLLNLLDKEGDCPSVVRKHKDEAERIYSEDSYAMLEAVPLYRHTLTVARNF HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IAKADQEALLADIILIALAHDIGKIPSYHDGMYSSGDHPIIAGLILNGIPEFVSLPNKED HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCHHH ILRAVTGHHLMKSDNILTDGLKQSDHEARQSELSALYLKMREQKNRRTENGVDTQFAAEE HHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH MEPTFARPATTELPSAERADPLGFALAKEKYTPQLINIPECIDPDAVIESLKNRINVVES CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC TPKGDQWSVVSMPNGVIYVNPDALWETIKEVSNYDPLVYASEGFEAEKRNLMHSVITELA CCCCCCEEEEECCCCEEEECCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH RTKQALATEYVADGYYTSKVSIITGGGKRLSHLLIPLTAQSFGVTASELEEQKSAQLKRM HHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VKDIKHKNKEVEQCVGR HHHHHHCCHHHHHHHCC >Mature Secondary Structure AKLAELSHLWKDREVQIKDAANLWREQSQENNSATPRPSFTHTEIERFFSEMIEHRSSI CHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH NGIRRDLIIWLLNLLDKEGDCPSVVRKHKDEAERIYSEDSYAMLEAVPLYRHTLTVARNF HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IAKADQEALLADIILIALAHDIGKIPSYHDGMYSSGDHPIIAGLILNGIPEFVSLPNKED HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCHHH ILRAVTGHHLMKSDNILTDGLKQSDHEARQSELSALYLKMREQKNRRTENGVDTQFAAEE HHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH MEPTFARPATTELPSAERADPLGFALAKEKYTPQLINIPECIDPDAVIESLKNRINVVES CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC TPKGDQWSVVSMPNGVIYVNPDALWETIKEVSNYDPLVYASEGFEAEKRNLMHSVITELA CCCCCCEEEEECCCCEEEECCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH RTKQALATEYVADGYYTSKVSIITGGGKRLSHLLIPLTAQSFGVTASELEEQKSAQLKRM HHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VKDIKHKNKEVEQCVGR HHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA