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The map label for this gene is traF [C]

Identifier: 39997222

GI number: 39997222

Start: 2343480

End: 2344319

Strand: Direct

Name: traF [C]

Synonym: GSU2124

Alternate gene names: 39997222

Gene position: 2343480-2344319 (Clockwise)

Preceding gene: 39997221

Following gene: 39997223

Centisome position: 61.44

GC content: 57.74

Gene sequence:

>840_bases
ATGCGTTGGCCGTTGATGGCTGCGGCAATGCTCTCGCTGTCAGTATCCGCCTCTGCAAGCTACTACACCGATTCTGCCAC
TGGATGGTGGTGGTACCAGAAGGAACCGGAGAAGCAGGCCGAGAAGCCCGCCAGAAAGAAGAAGCCGGCAAAGCCCGTCC
CGTCCCTCAAGGACTACACCTATGAGCAGATCTGGGAGATGCATCCCGACCAGTTTCAGGAATTCGCCGAGGCGTTGAAG
AAGAAGGCGGTCCAGAAGCCGAGCGAAGAGAATGTGAAGGAGTATTTCGAGGTACAGGAGATAGCCCGCAAGAAGGCGCT
CGCCTTTTCCAACGTGGCCCAGTTTGTCTGGCAGAAATACCCGGAGCTGACCACGAAAAAGGACTACCCAATCACCACCC
CCGGCAACCTGGCCCGGATCTCACAGATCAACGAGGAACGGCAGCGCGTGTTGCGGGACAACCGGGACGACTTCGCTCTG
GTCTACTTCCAGCGGCCCGACTGCAGCTACTGTGATGAGCAATCCCGCATTCTCGACTGGTTCACCAACGAAACGGGCTG
GACCGTGAAGAAGGTCAACATCAGTGAGAACACGGGACTTGCCGCCAAATTCAGCGTGGAGATCACCCCGACCCTGATCC
TGATCCAGAAAGGGAATCAGGATTACCTGCCGGTTTCAGCCGGGGTCATCTCGGCCGACGAAATCGAGGACAAGGCGTAC
CGGGCAGTGCGTCTGCTGAGGGGGGACATCTCCCCGGAGGAGTATTCGCTCTATGAATTCCAGAAGGGAGGCGGCTTCGA
TGTGAAGAAGCGCCGCCTCCAAGACAAGAATCAGCCGTGA

Upstream 100 bases:

>100_bases
AGTCGTTCGGCGTAACAGCGTCTGAACTGGAAGAACAGAAATCAGCGCAACTGAAGAGAATGGTTAAAGATATCAAGCAT
AAGAACAAGGAGGTGGAACA

Downstream 100 bases:

>100_bases
GGTCCCGGTCCAACAGCTACAGAGAAGAGGTGCCCGTGTGAAACGAACCGTATGTACCAGAACTACCGCCGCCTGCCTGG
CGGCAGCGATAGCATTGAAC

Product: thioredoxin-related domain protein

Products: NA

Alternate protein names: Thioredoxin-Related Domain Protein; Thioredoxin-Related Protein; Glutaredoxin

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MRWPLMAAAMLSLSVSASASYYTDSATGWWWYQKEPEKQAEKPARKKKPAKPVPSLKDYTYEQIWEMHPDQFQEFAEALK
KKAVQKPSEENVKEYFEVQEIARKKALAFSNVAQFVWQKYPELTTKKDYPITTPGNLARISQINEERQRVLRDNRDDFAL
VYFQRPDCSYCDEQSRILDWFTNETGWTVKKVNISENTGLAAKFSVEITPTLILIQKGNQDYLPVSAGVISADEIEDKAY
RAVRLLRGDISPEEYSLYEFQKGGGFDVKKRRLQDKNQP

Sequences:

>Translated_279_residues
MRWPLMAAAMLSLSVSASASYYTDSATGWWWYQKEPEKQAEKPARKKKPAKPVPSLKDYTYEQIWEMHPDQFQEFAEALK
KKAVQKPSEENVKEYFEVQEIARKKALAFSNVAQFVWQKYPELTTKKDYPITTPGNLARISQINEERQRVLRDNRDDFAL
VYFQRPDCSYCDEQSRILDWFTNETGWTVKKVNISENTGLAAKFSVEITPTLILIQKGNQDYLPVSAGVISADEIEDKAY
RAVRLLRGDISPEEYSLYEFQKGGGFDVKKRRLQDKNQP
>Mature_279_residues
MRWPLMAAAMLSLSVSASASYYTDSATGWWWYQKEPEKQAEKPARKKKPAKPVPSLKDYTYEQIWEMHPDQFQEFAEALK
KKAVQKPSEENVKEYFEVQEIARKKALAFSNVAQFVWQKYPELTTKKDYPITTPGNLARISQINEERQRVLRDNRDDFAL
VYFQRPDCSYCDEQSRILDWFTNETGWTVKKVNISENTGLAAKFSVEITPTLILIQKGNQDYLPVSAGVISADEIEDKAY
RAVRLLRGDISPEEYSLYEFQKGGGFDVKKRRLQDKNQP

Specific function: Involved In F Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32390; Mature: 32390

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWPLMAAAMLSLSVSASASYYTDSATGWWWYQKEPEKQAEKPARKKKPAKPVPSLKDYT
CCCHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCHHHHHCCHHHCCCCCCCCCHHHCC
YEQIWEMHPDQFQEFAEALKKKAVQKPSEENVKEYFEVQEIARKKALAFSNVAQFVWQKY
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PELTTKKDYPITTPGNLARISQINEERQRVLRDNRDDFALVYFQRPDCSYCDEQSRILDW
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHH
FTNETGWTVKKVNISENTGLAAKFSVEITPTLILIQKGNQDYLPVSAGVISADEIEDKAY
HCCCCCCEEEEEECCCCCCCEEEEEEEECEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
RAVRLLRGDISPEEYSLYEFQKGGGFDVKKRRLQDKNQP
HHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MRWPLMAAAMLSLSVSASASYYTDSATGWWWYQKEPEKQAEKPARKKKPAKPVPSLKDYT
CCCHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCHHHHHCCHHHCCCCCCCCCHHHCC
YEQIWEMHPDQFQEFAEALKKKAVQKPSEENVKEYFEVQEIARKKALAFSNVAQFVWQKY
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PELTTKKDYPITTPGNLARISQINEERQRVLRDNRDDFALVYFQRPDCSYCDEQSRILDW
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHH
FTNETGWTVKKVNISENTGLAAKFSVEITPTLILIQKGNQDYLPVSAGVISADEIEDKAY
HCCCCCCEEEEEECCCCCCCEEEEEEEECEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
RAVRLLRGDISPEEYSLYEFQKGGGFDVKKRRLQDKNQP
HHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA