Click here to switch to the map view.

The map label for this gene is 39997036

Identifier: 39997036

GI number: 39997036

Start: 2120112

End: 2120639

Strand: Direct

Name: 39997036

Synonym: GSU1938

Alternate gene names: NA

Gene position: 2120112-2120639 (Clockwise)

Preceding gene: 39997035

Following gene: 39997037

Centisome position: 55.59

GC content: 59.66

Gene sequence:

>528_bases
ATGAAATTTCGCCTGCTCGCGGCTGTCCTGATCCTGATCCTGCCGACCGGGTGCGCTCCCGTACGCAAAGTCGTGACGGA
TATTCGGCAACGTTCAGCCCAGGAAGAGAAGTTGAGCCTGGCGGTGGAACTCATCGCCCGGGGGCGAATCGACAACGCCA
CAGTGCTTCTCGACGCCATCATCATCGAAAAGCCGGTCCGCGGCGTCACTGACGAAGCCCTTTTCCGCCTGGCACTGCTC
CGGCTGCCCAGCGAACCCCGCACCGGAGACATCGCCAAGGCCACAAAACTTCTGGACCAACTGCAACGCGACTATCCCGA
CAGCCCCTGGGCCCACCAGGCCCTTCCCCTCAGTGACTTCATCGCTGAAATCCCAGCCCGCATCGAAGCAGCGGGCGAAC
TGCGCCGCCAGATCAAATCACTGCGTGACCTGAACCTGTCCCTGACCAGGGAAAACAAGGAACTGAGACTCAACCTGGAA
AAACTCAAGACCCTTGACCTGGAGTTGGAGCGAAAGCTCAAACCGTAA

Upstream 100 bases:

>100_bases
CCTCAGCCGTTGATATCGCCAAAGCGGCCGCTGATATCAAAGACTTGCTGAAAAGCACGCCGGGAAGCAATTACCTTATC
AACCGGCGCAAAGGAAAACG

Downstream 100 bases:

>100_bases
AATTGTGTCAGTTTTTCCGTCAAAACCAAGGAAAACACCTCCATTAGTGTAAACATTTTCGACACCCCATTCATCAACGA
CTTATATCACCAATATAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKFRLLAAVLILILPTGCAPVRKVVTDIRQRSAQEEKLSLAVELIARGRIDNATVLLDAIIIEKPVRGVTDEALFRLALL
RLPSEPRTGDIAKATKLLDQLQRDYPDSPWAHQALPLSDFIAEIPARIEAAGELRRQIKSLRDLNLSLTRENKELRLNLE
KLKTLDLELERKLKP

Sequences:

>Translated_175_residues
MKFRLLAAVLILILPTGCAPVRKVVTDIRQRSAQEEKLSLAVELIARGRIDNATVLLDAIIIEKPVRGVTDEALFRLALL
RLPSEPRTGDIAKATKLLDQLQRDYPDSPWAHQALPLSDFIAEIPARIEAAGELRRQIKSLRDLNLSLTRENKELRLNLE
KLKTLDLELERKLKP
>Mature_175_residues
MKFRLLAAVLILILPTGCAPVRKVVTDIRQRSAQEEKLSLAVELIARGRIDNATVLLDAIIIEKPVRGVTDEALFRLALL
RLPSEPRTGDIAKATKLLDQLQRDYPDSPWAHQALPLSDFIAEIPARIEAAGELRRQIKSLRDLNLSLTRENKELRLNLE
KLKTLDLELERKLKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19782; Mature: 19782

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRLLAAVLILILPTGCAPVRKVVTDIRQRSAQEEKLSLAVELIARGRIDNATVLLDAI
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
IIEKPVRGVTDEALFRLALLRLPSEPRTGDIAKATKLLDQLQRDYPDSPWAHQALPLSDF
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
IAEIPARIEAAGELRRQIKSLRDLNLSLTRENKELRLNLEKLKTLDLELERKLKP
HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHEEEHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFRLLAAVLILILPTGCAPVRKVVTDIRQRSAQEEKLSLAVELIARGRIDNATVLLDAI
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
IIEKPVRGVTDEALFRLALLRLPSEPRTGDIAKATKLLDQLQRDYPDSPWAHQALPLSDF
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
IAEIPARIEAAGELRRQIKSLRDLNLSLTRENKELRLNLEKLKTLDLELERKLKP
HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHEEEHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA