Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39996867
Identifier: 39996867
GI number: 39996867
Start: 1930640
End: 1932040
Strand: Direct
Name: 39996867
Synonym: GSU1768
Alternate gene names: NA
Gene position: 1930640-1932040 (Clockwise)
Preceding gene: 39996860
Following gene: 39996916
Centisome position: 50.62
GC content: 57.17
Gene sequence:
>1401_bases ATGTGCCCCATGCAGAATTACCCTTATGTTATCACTGTCTCCTCGGAAAAGGGAGGGGTCGGCAAGACCACTCTCGCCAC CAACCTGGCAATCTATCTGAAGGCCCTCGACGAGAATCTGCCGGTTACCATCTTTTCCTTCGACAACCACTTCACCGTGG ACCGGATGTTCGAGATCAGGGGGCAGAGGCTGACCGGCAGCGTGGCCGACCTGCTCATGGAATCTCCGCCCCGCGACCTG ATCCACACCGGTCAGTACGGAGTCGGCTACATCCCTTCGTCCGCCAGCCTCAACGACCTCAAAGGATCCATTCGTGGGCC CATGGTCCTGGCACGGCTTCTGGCCGCCTCACGTATTCCCGGAGTTCTCATCATCGACACGAGGCCCGACTTGGACATGC TCACCCAGAATGCCCTGTTCGCGGCAGATCGGGCCATCATCCCAGTCAAGGACATGCCGAGTCTGGAGAATTGCCGCAAC ATTTTCGCGTTGTTCGAACAGCGGGGTCTCGACCGCAAGAGTCTCAGCCTCATTCCCTGCCTCGTGGACGAACGAATCAA GTTCGACGGCCCCTTCAACGACCAGAAAACACTGCTCAAAGCTTACGCCATAAATCGCGGCTACCGTTGCCTCGATGTGT ATATCTCCAAGAGTCCCAAGGTAGAGAGCCTCAATACCAACCCCGACGGGAAAATTTATCCGATTCTGACCCATGCCAAG TGGACTGAAGTCCATGGTCAGTTCGCGCAGTTGGCCCAGATTCTCATCAATGAGTACAACGCCACCACGGAGCCTCGCTC ACTCCTCTTCCATAAGTGGCTTCAGACCGAGGAAAGCCGCAAGAAGGAAGAGTTTTTCGCTCGGCTTTCAGGGATCAAGA GCCAGTGCCTGCTTTGCGGCAAACCGGTGAGCGATGATGGAGACGGCCGTCACTCGTTCTACTTCGAGGTGTCCGACGGC AGCGCGGCCGGTTTCTTTGAGGAAGAGTGCTTCCTCACCATGCTCATGACCAACATCTACAACATGGACGTGAGTATGGT GGATGACGCCCCGACGGTTCATCTCATGCGCGATTCGTCCAGAGAGTCGGCCTTTGTCTTCCGGCCGGCGTCGAACGGCG GTGCCGTGGAGTTCCATCGGTTCAGTCTCGACGGTACGCTCCTGATCAAGAAGAATTACCCCCTCAGAGAATACGAAGGA GGGCTGCTGCGACGGGAACGCAGCAGGCTTTACACCCTCATGACCGAAGCTCTGGGAACAGCGGGCGCCGGAAGCTCCGA TCGTTTCATCCTTGTTCACCCGGTAACGCGGGACAATCCCCAGGGGATTCTGCGGGACGAGAGCTACCGGGGTCTCACCA AGCTCAAACAGCACATCGCGGCCCAGATTGCTTCATCGTAA
Upstream 100 bases:
>100_bases ACGGGAACCCCGGGTTAAAGTTATTTAGTATCAAATAGATATAATTCAGGGGCAACGGCCTGTCAAACCGGGTTGACCGC TGTCAGGCGGACAGTGTAGT
Downstream 100 bases:
>100_bases CGCCCCTGCTACCTGACCAGCCTCGACACCGTCACAAAGGTGATCCCCTCGTCCCGCAGACGCGGTAACTCGACGGCAAG GGTCTGGATGGTGGCAGGAT
Product: ParA family protein
Products: NA
Alternate protein names: Chromosome Partitioning ATPase; ATPase Involved In Chromosome Partitioning-Like Protein
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MCPMQNYPYVITVSSEKGGVGKTTLATNLAIYLKALDENLPVTIFSFDNHFTVDRMFEIRGQRLTGSVADLLMESPPRDL IHTGQYGVGYIPSSASLNDLKGSIRGPMVLARLLAASRIPGVLIIDTRPDLDMLTQNALFAADRAIIPVKDMPSLENCRN IFALFEQRGLDRKSLSLIPCLVDERIKFDGPFNDQKTLLKAYAINRGYRCLDVYISKSPKVESLNTNPDGKIYPILTHAK WTEVHGQFAQLAQILINEYNATTEPRSLLFHKWLQTEESRKKEEFFARLSGIKSQCLLCGKPVSDDGDGRHSFYFEVSDG SAAGFFEEECFLTMLMTNIYNMDVSMVDDAPTVHLMRDSSRESAFVFRPASNGGAVEFHRFSLDGTLLIKKNYPLREYEG GLLRRERSRLYTLMTEALGTAGAGSSDRFILVHPVTRDNPQGILRDESYRGLTKLKQHIAAQIASS
Sequences:
>Translated_466_residues MCPMQNYPYVITVSSEKGGVGKTTLATNLAIYLKALDENLPVTIFSFDNHFTVDRMFEIRGQRLTGSVADLLMESPPRDL IHTGQYGVGYIPSSASLNDLKGSIRGPMVLARLLAASRIPGVLIIDTRPDLDMLTQNALFAADRAIIPVKDMPSLENCRN IFALFEQRGLDRKSLSLIPCLVDERIKFDGPFNDQKTLLKAYAINRGYRCLDVYISKSPKVESLNTNPDGKIYPILTHAK WTEVHGQFAQLAQILINEYNATTEPRSLLFHKWLQTEESRKKEEFFARLSGIKSQCLLCGKPVSDDGDGRHSFYFEVSDG SAAGFFEEECFLTMLMTNIYNMDVSMVDDAPTVHLMRDSSRESAFVFRPASNGGAVEFHRFSLDGTLLIKKNYPLREYEG GLLRRERSRLYTLMTEALGTAGAGSSDRFILVHPVTRDNPQGILRDESYRGLTKLKQHIAAQIASS >Mature_466_residues MCPMQNYPYVITVSSEKGGVGKTTLATNLAIYLKALDENLPVTIFSFDNHFTVDRMFEIRGQRLTGSVADLLMESPPRDL IHTGQYGVGYIPSSASLNDLKGSIRGPMVLARLLAASRIPGVLIIDTRPDLDMLTQNALFAADRAIIPVKDMPSLENCRN IFALFEQRGLDRKSLSLIPCLVDERIKFDGPFNDQKTLLKAYAINRGYRCLDVYISKSPKVESLNTNPDGKIYPILTHAK WTEVHGQFAQLAQILINEYNATTEPRSLLFHKWLQTEESRKKEEFFARLSGIKSQCLLCGKPVSDDGDGRHSFYFEVSDG SAAGFFEEECFLTMLMTNIYNMDVSMVDDAPTVHLMRDSSRESAFVFRPASNGGAVEFHRFSLDGTLLIKKNYPLREYEG GLLRRERSRLYTLMTEALGTAGAGSSDRFILVHPVTRDNPQGILRDESYRGLTKLKQHIAAQIASS
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52203; Mature: 52203
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPMQNYPYVITVSSEKGGVGKTTLATNLAIYLKALDENLPVTIFSFDNHFTVDRMFEIR CCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEEEECCCCCCEEEEECCCCCCHHHHHHHC GQRLTGSVADLLMESPPRDLIHTGQYGVGYIPSSASLNDLKGSIRGPMVLARLLAASRIP CCCCCCHHHHHHHCCCCHHHHHCCCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHHHCCC GVLIIDTRPDLDMLTQNALFAADRAIIPVKDMPSLENCRNIFALFEQRGLDRKSLSLIPC CEEEEECCCCHHHHHCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCEEEHH LVDERIKFDGPFNDQKTLLKAYAINRGYRCLDVYISKSPKVESLNTNPDGKIYPILTHAK HHCCCEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCC WTEVHGQFAQLAQILINEYNATTEPRSLLFHKWLQTEESRKKEEFFARLSGIKSQCLLCG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHEEEEC KPVSDDGDGRHSFYFEVSDGSAAGFFEEECFLTMLMTNIYNMDVSMVDDAPTVHLMRDSS CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCC RESAFVFRPASNGGAVEFHRFSLDGTLLIKKNYPLREYEGGLLRRERSRLYTLMTEALGT CCCEEEEEECCCCCEEEEEEEECCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHCC AGAGSSDRFILVHPVTRDNPQGILRDESYRGLTKLKQHIAAQIASS CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MCPMQNYPYVITVSSEKGGVGKTTLATNLAIYLKALDENLPVTIFSFDNHFTVDRMFEIR CCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEEEECCCCCCEEEEECCCCCCHHHHHHHC GQRLTGSVADLLMESPPRDLIHTGQYGVGYIPSSASLNDLKGSIRGPMVLARLLAASRIP CCCCCCHHHHHHHCCCCHHHHHCCCCCCEECCCCCCHHHHCCCCCHHHHHHHHHHHHCCC GVLIIDTRPDLDMLTQNALFAADRAIIPVKDMPSLENCRNIFALFEQRGLDRKSLSLIPC CEEEEECCCCHHHHHCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCEEEHH LVDERIKFDGPFNDQKTLLKAYAINRGYRCLDVYISKSPKVESLNTNPDGKIYPILTHAK HHCCCEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEECCC WTEVHGQFAQLAQILINEYNATTEPRSLLFHKWLQTEESRKKEEFFARLSGIKSQCLLCG HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHEEEEC KPVSDDGDGRHSFYFEVSDGSAAGFFEEECFLTMLMTNIYNMDVSMVDDAPTVHLMRDSS CCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCC RESAFVFRPASNGGAVEFHRFSLDGTLLIKKNYPLREYEGGLLRRERSRLYTLMTEALGT CCCEEEEEECCCCCEEEEEEEECCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHCC AGAGSSDRFILVHPVTRDNPQGILRDESYRGLTKLKQHIAAQIASS CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA