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The map label for this gene is slp [C]

Identifier: 39996916

GI number: 39996916

Start: 1983011

End: 1983580

Strand: Direct

Name: slp [C]

Synonym: GSU1817

Alternate gene names: 39996916

Gene position: 1983011-1983580 (Clockwise)

Preceding gene: 39996867

Following gene: 39996923

Centisome position: 51.99

GC content: 57.37

Gene sequence:

>570_bases
ATGAACAGATCGTTCAGGTTGGTGATGATGGTCCTTGCATGCGTCGTCTTGGCGGCATGCACACGGGTTCTCAGCGACGA
GGCCAGGCGCCTGGTGGATCCGACCGTAACCTTTACGGGACTGAAGGCGAATCCTGACGCATTTCTGGGGAAATACGTCA
TGCTTGGCGGGGTCATTGTCGACACGAAAAACAACAGTGATGGGGGGCAAATCGAGGTAATGCAGGTCGGTCTCGACGAA
AGCGGCATTCCCGGCGACACCTTCCGCTCGGAAGGACGGTTCCTCGCCACCTCCGCACAGTTCCTCGATGCGGTGATCTT
CAAACCGGGACGTCTGGTGACCTTGGTGGGAGAGATCAAGGGTAAAAAGGTTCAGCCTCTTGACGAAGTGAACTACAGCT
ACCCGGTGGTTGCCATCAAGGAGATCCACGTCTGGAAGAGCCAGGACTATGACAGTGGATATCCCTATCCGACGCCGGCA
CCCTATTACTACTACGATCCCTACTGGTACGGAGTCTGGCCCGGACCTTACTGGCACCGCCCGCTCGGTCCCGTCTACCG
CAGGTGGTGA

Upstream 100 bases:

>100_bases
GATTTCCGTATCCCGGCAGCGTCAAGGAGACGGGGACCGTCGTGGACTTTTCCCCATGTTCGGCTACCATTATGGTCAGA
CAGGAGAAAGGAGGCCAATC

Downstream 100 bases:

>100_bases
GCACCCTCCCTCGCGTCGAATCAAGAAGGGGCGGTCTTTGCGACCGCCCCTTCCGTGTTCCCCCTATCGGTCCAGCATCA
TCTCCATGAGTCTGAAGCCG

Product: Slp family outer membrane lipoprotein

Products: NA

Alternate protein names: Slp Family Outer Membrane Lipoprotein; Starvation-Inducible Outer Membrane Lipoprotein; Outer Membrane Lipoprotein Slp Family; Outer Membrane Protein Slp

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MNRSFRLVMMVLACVVLAACTRVLSDEARRLVDPTVTFTGLKANPDAFLGKYVMLGGVIVDTKNNSDGGQIEVMQVGLDE
SGIPGDTFRSEGRFLATSAQFLDAVIFKPGRLVTLVGEIKGKKVQPLDEVNYSYPVVAIKEIHVWKSQDYDSGYPYPTPA
PYYYYDPYWYGVWPGPYWHRPLGPVYRRW

Sequences:

>Translated_189_residues
MNRSFRLVMMVLACVVLAACTRVLSDEARRLVDPTVTFTGLKANPDAFLGKYVMLGGVIVDTKNNSDGGQIEVMQVGLDE
SGIPGDTFRSEGRFLATSAQFLDAVIFKPGRLVTLVGEIKGKKVQPLDEVNYSYPVVAIKEIHVWKSQDYDSGYPYPTPA
PYYYYDPYWYGVWPGPYWHRPLGPVYRRW
>Mature_189_residues
MNRSFRLVMMVLACVVLAACTRVLSDEARRLVDPTVTFTGLKANPDAFLGKYVMLGGVIVDTKNNSDGGQIEVMQVGLDE
SGIPGDTFRSEGRFLATSAQFLDAVIFKPGRLVTLVGEIKGKKVQPLDEVNYSYPVVAIKEIHVWKSQDYDSGYPYPTPA
PYYYYDPYWYGVWPGPYWHRPLGPVYRRW

Specific function: The Induction Of Slp May Help To Stabilize The Outer Membrane During Carbon Starvation And Stationary Phase. [C]

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082278, Length=183, Percent_Identity=25.6830601092896, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21341; Mature: 21341

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSFRLVMMVLACVVLAACTRVLSDEARRLVDPTVTFTGLKANPDAFLGKYVMLGGVIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCEEE
DTKNNSDGGQIEVMQVGLDESGIPGDTFRSEGRFLATSAQFLDAVIFKPGRLVTLVGEIK
ECCCCCCCCEEEEEEECCCCCCCCCCCHHCCCCEEEEHHHHHHHHHCCCCEEEEEEECCC
GKKVQPLDEVNYSYPVVAIKEIHVWKSQDYDSGYPYPTPAPYYYYDPYWYGVWPGPYWHR
CCCCCCHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCC
PLGPVYRRW
CCCHHHHCC
>Mature Secondary Structure
MNRSFRLVMMVLACVVLAACTRVLSDEARRLVDPTVTFTGLKANPDAFLGKYVMLGGVIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCEEE
DTKNNSDGGQIEVMQVGLDESGIPGDTFRSEGRFLATSAQFLDAVIFKPGRLVTLVGEIK
ECCCCCCCCEEEEEEECCCCCCCCCCCHHCCCCEEEEHHHHHHHHHCCCCEEEEEEECCC
GKKVQPLDEVNYSYPVVAIKEIHVWKSQDYDSGYPYPTPAPYYYYDPYWYGVWPGPYWHR
CCCCCCHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCC
PLGPVYRRW
CCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA