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The map label for this gene is 39996860

Identifier: 39996860

GI number: 39996860

Start: 1922825

End: 1924360

Strand: Direct

Name: 39996860

Synonym: GSU1761

Alternate gene names: NA

Gene position: 1922825-1924360 (Clockwise)

Preceding gene: 39996859

Following gene: 39996867

Centisome position: 50.41

GC content: 60.35

Gene sequence:

>1536_bases
ATGACCGCACGTAAAGGGCTAATTTCGCTCCAGACACAACAGGGCACGCTGCCCCGTAAAACCTTCACCAGCCTGATCAT
GCTTATGATCACGGCACTTATGACATTGGCCGGCTGTGGCGGTGGAGGCGGTGGTTCTACGGCTGCAACTTCAACGGGCA
CGCCGACTACCGCGGCAGTATCAGGGGTGGCAGCCACCGGAGCCCCCCTTGTGGGCACGATCCGGCTCAAGGATTCTTCG
TCGCCGGCAGTTGAAAAAACAACCTCTTCCGCCACAGACGGCTCCTTCACAGTTGATGTTACCGGTTTGACGCCGCCGTA
CATATTGAAAGCTGACGGCACGTCAGGCGGCACTGCCGTTACCATCTGCTCTTTCGCGGCCGGCCCCGGGACCGCAAACA
TCAACCCGCTATCCAATGCAGCACTGGCCAGCGCCGCCGGTGTAAGTGATCCGGCTGCAGCAGTCTATGCATCCCCCTCC
CCCGCAATGCTCGAAACCATTAGCGCGAACCTGCCGGCCGCCGTAGCTGCCCTGCGCACCCAACTCAAGCCCCTGCTCGA
CCAATACGGTGCCAACGTGCACCCGATCACCGCTCCCTTCACGGCCAACCACACTGGTCTCGACGCCGTTCTGGACGTAA
TCCGGGTTCAACTTGGTGCCGGCACCATGGTAGTCGCCAACAGAGCAACTAATGCGCCGATCTTCAGTGCTCCCCTGATG
AACATTAACGGCGGGACCTTCACCATGGGCAATATGCCGACTCCCCCGACCCCGGCAACAGACGGACAAGGATTGTACGC
AGCCAATTGCGCGGCCTGCCATGGTGCTTTGGCCACTTCTGAGAAAAAAGGGACAACGCTTGCGCGTCTCCAGAGTGCCG
TAAGCGCGAACGCCGGCGGCATGGGATTCCTCTCCTCGCTGACCTCAGCTCAGTTGCAGGCAATCGTTGACGTCTTGGCA
GTGGCTCCTACTCCTACTCCTACTCCTACGCCCACTCCTACGCCCACTCCTACGCCCACTCCTACGCCCACTCCTACGCC
CACTCCTACGCCCAACGGGTCGGCACTCTACGGGAATAACTGTCAGGCATGCCATGGCTCGATCACGAATTCCGACATCC
AGACCAGGACTGTATCGGCAATCCAATCGGCAATCTCCGGCAACCGTGGCGGCATGGGGTTCCTTTCAACCCTCACGTCC
GCTGAAATTCAGGCGATAGCCACCTCGCTGGCATCGGCTGTCACACCGACTCCTACACCGACTCCTACACCGACTCCTAC
ACCGACTCCTACACCGACTCCTACACCGACTCCGACGCCGACTCCCACCGTCGACCCGGGCAAGACCGTCTACGACAGCC
GGTGCGCATCGTGTCACCGCCTAGGCACCTATGACGCCTCCGGCAGTGCTCCGAACCTCTCCCGGGCCGGGACGAAGATT
GACGGAAAGTTCACCGCCGGCGTTTCGGGGCACAAGGGAATTACGCTCACCGCCGCGGATCTTGCAAATCTTAAGACCTT
TGTCAACGCAAACTGA

Upstream 100 bases:

>100_bases
GCCGAAATATCTGAACGATATCAGGCCCCGGCTTTTTTGTGCCCGGGCTGCCGGATCGTTCTGATCCGGTACACTACCAC
GCGCTCAGGGAGGAAACTTA

Downstream 100 bases:

>100_bases
TCAACTCTGATCTCCAACGGAAAACGGCCTGCTTTTGCAGGCCGTTTTCTATTTTCCCCGAACTCGGATTATCGTTCCGG
CGTGCCTCCGCCACCCACCT

Product: cytochrome C

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MTARKGLISLQTQQGTLPRKTFTSLIMLMITALMTLAGCGGGGGGSTAATSTGTPTTAAVSGVAATGAPLVGTIRLKDSS
SPAVEKTTSSATDGSFTVDVTGLTPPYILKADGTSGGTAVTICSFAAGPGTANINPLSNAALASAAGVSDPAAAVYASPS
PAMLETISANLPAAVAALRTQLKPLLDQYGANVHPITAPFTANHTGLDAVLDVIRVQLGAGTMVVANRATNAPIFSAPLM
NINGGTFTMGNMPTPPTPATDGQGLYAANCAACHGALATSEKKGTTLARLQSAVSANAGGMGFLSSLTSAQLQAIVDVLA
VAPTPTPTPTPTPTPTPTPTPTPTPTPTPTPNGSALYGNNCQACHGSITNSDIQTRTVSAIQSAISGNRGGMGFLSTLTS
AEIQAIATSLASAVTPTPTPTPTPTPTPTPTPTPTPTPTPTPTVDPGKTVYDSRCASCHRLGTYDASGSAPNLSRAGTKI
DGKFTAGVSGHKGITLTAADLANLKTFVNAN

Sequences:

>Translated_511_residues
MTARKGLISLQTQQGTLPRKTFTSLIMLMITALMTLAGCGGGGGGSTAATSTGTPTTAAVSGVAATGAPLVGTIRLKDSS
SPAVEKTTSSATDGSFTVDVTGLTPPYILKADGTSGGTAVTICSFAAGPGTANINPLSNAALASAAGVSDPAAAVYASPS
PAMLETISANLPAAVAALRTQLKPLLDQYGANVHPITAPFTANHTGLDAVLDVIRVQLGAGTMVVANRATNAPIFSAPLM
NINGGTFTMGNMPTPPTPATDGQGLYAANCAACHGALATSEKKGTTLARLQSAVSANAGGMGFLSSLTSAQLQAIVDVLA
VAPTPTPTPTPTPTPTPTPTPTPTPTPTPTPNGSALYGNNCQACHGSITNSDIQTRTVSAIQSAISGNRGGMGFLSTLTS
AEIQAIATSLASAVTPTPTPTPTPTPTPTPTPTPTPTPTPTPTVDPGKTVYDSRCASCHRLGTYDASGSAPNLSRAGTKI
DGKFTAGVSGHKGITLTAADLANLKTFVNAN
>Mature_510_residues
TARKGLISLQTQQGTLPRKTFTSLIMLMITALMTLAGCGGGGGGSTAATSTGTPTTAAVSGVAATGAPLVGTIRLKDSSS
PAVEKTTSSATDGSFTVDVTGLTPPYILKADGTSGGTAVTICSFAAGPGTANINPLSNAALASAAGVSDPAAAVYASPSP
AMLETISANLPAAVAALRTQLKPLLDQYGANVHPITAPFTANHTGLDAVLDVIRVQLGAGTMVVANRATNAPIFSAPLMN
INGGTFTMGNMPTPPTPATDGQGLYAANCAACHGALATSEKKGTTLARLQSAVSANAGGMGFLSSLTSAQLQAIVDVLAV
APTPTPTPTPTPTPTPTPTPTPTPTPTPTPNGSALYGNNCQACHGSITNSDIQTRTVSAIQSAISGNRGGMGFLSTLTSA
EIQAIATSLASAVTPTPTPTPTPTPTPTPTPTPTPTPTPTPTVDPGKTVYDSRCASCHRLGTYDASGSAPNLSRAGTKID
GKFTAGVSGHKGITLTAADLANLKTFVNAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50618; Mature: 50486

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARKGLISLQTQQGTLPRKTFTSLIMLMITALMTLAGCGGGGGGSTAATSTGTPTTAAV
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
SGVAATGAPLVGTIRLKDSSSPAVEKTTSSATDGSFTVDVTGLTPPYILKADGTSGGTAV
HCHHHCCCCEEEEEEECCCCCCCHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEE
TICSFAAGPGTANINPLSNAALASAAGVSDPAAAVYASPSPAMLETISANLPAAVAALRT
EEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHH
QLKPLLDQYGANVHPITAPFTANHTGLDAVLDVIRVQLGAGTMVVANRATNAPIFSAPLM
HHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCEE
NINGGTFTMGNMPTPPTPATDGQGLYAANCAACHGALATSEKKGTTLARLQSAVSANAGG
ECCCCEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
MGFLSSLTSAQLQAIVDVLAVAPTPTPTPTPTPTPTPTPTPTPTPTPTPTPNGSALYGNN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
CQACHGSITNSDIQTRTVSAIQSAISGNRGGMGFLSTLTSAEIQAIATSLASAVTPTPTP
CHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TPTPTPTPTPTPTPTPTPTPTPTVDPGKTVYDSRCASCHRLGTYDASGSAPNLSRAGTKI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCC
DGKFTAGVSGHKGITLTAADLANLKTFVNAN
CCEEEECCCCCCCEEEEHHHHHHHHHHHCCC
>Mature Secondary Structure 
TARKGLISLQTQQGTLPRKTFTSLIMLMITALMTLAGCGGGGGGSTAATSTGTPTTAAV
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
SGVAATGAPLVGTIRLKDSSSPAVEKTTSSATDGSFTVDVTGLTPPYILKADGTSGGTAV
HCHHHCCCCEEEEEEECCCCCCCHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEE
TICSFAAGPGTANINPLSNAALASAAGVSDPAAAVYASPSPAMLETISANLPAAVAALRT
EEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHH
QLKPLLDQYGANVHPITAPFTANHTGLDAVLDVIRVQLGAGTMVVANRATNAPIFSAPLM
HHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCEE
NINGGTFTMGNMPTPPTPATDGQGLYAANCAACHGALATSEKKGTTLARLQSAVSANAGG
ECCCCEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
MGFLSSLTSAQLQAIVDVLAVAPTPTPTPTPTPTPTPTPTPTPTPTPTPTPNGSALYGNN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
CQACHGSITNSDIQTRTVSAIQSAISGNRGGMGFLSTLTSAEIQAIATSLASAVTPTPTP
CHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TPTPTPTPTPTPTPTPTPTPTPTVDPGKTVYDSRCASCHRLGTYDASGSAPNLSRAGTKI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCC
DGKFTAGVSGHKGITLTAADLANLKTFVNAN
CCEEEECCCCCCCEEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA