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The map label for this gene is ccdA [H]

Identifier: 39996424

GI number: 39996424

Start: 1447999

End: 1448727

Strand: Direct

Name: ccdA [H]

Synonym: GSU1322

Alternate gene names: 39996424

Gene position: 1447999-1448727 (Clockwise)

Preceding gene: 39996423

Following gene: 39996425

Centisome position: 37.96

GC content: 59.53

Gene sequence:

>729_bases
ATGGAATCAACCAACATAACCTTTGTGGGCGCATTCGTGGCGGGACTCCTGTCCTTCCTGTCCCCCTGCGTGCTGCCGCT
TATTCCGTCCTTCATAACCTACATCACCGGCCTCTCCTTCGCCGACATCCAGTCCGAGCACCCGACCCACAAGGTGCGGC
AGCAGACCATTGTCCACTCGCTTCTCTTCATCGCCGGCTTCACCTTTGTCTTCGTGCTCCTCGGCGCCTCGGCGACCTTC
ATCGGCGGATTCCTCCATGAGCACATGAACGTCATCCGCAAGGTTGGCGGCGCGCTGATCGTGATCTTCGGCATTCACGT
ATCGGGCCTCGTGCCCATCCATCTCCTGCTGGGGGAAAAGCGGCTCCAGGTCCACCGCAAACCGGCCGGGTACCTGGGCA
GCTTCCTGGTGGGGCTCGCCTTTGCCGCCGGCTGGACCCCCTGCATCGGACCGATCCTGGCTTCCATCCTCATGGTGGCC
GCCACCGAAGAGACCGTGACCAAGGGGATCCTTCTCCTGTTCACCTATTCCATGGGGCTGGCCATTCCGTTCTTCCTGTC
GTCCCTGGCCATGCACCAGTTCCTGACCTTCTTCAACCGCTTCAAGAAGCATATCCGCATCCTGGAGATCGTCACCGGGC
TTTTCCTTGTTGTCGTCGGCGTGATGATTTTCACCAATTACCTGAGCGTCCTTTCCCGCTACACCATGAAGTGGTTCGGG
GGAATGTAG

Upstream 100 bases:

>100_bases
AAGAAGGTCGTGGGGGGCGTGCAGTGGGACCACCCCGACGTGATCGCCTATCTCAACGGCGCCCTGGCCAAGTAGGGCAC
CCCGCCAAGTCGAGGTATTC

Downstream 100 bases:

>100_bases
GGTGGCCGGAGCCTCCGTCTCAATCCAACTGGCGGTGGCCGACCTGGACGCCACCGAAGCCTTTTACGTGGGAATCCTCG
AACTGGACGTGAACCGCGCG

Product: cytochrome C biogenesis protein CcdA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MESTNITFVGAFVAGLLSFLSPCVLPLIPSFITYITGLSFADIQSEHPTHKVRQQTIVHSLLFIAGFTFVFVLLGASATF
IGGFLHEHMNVIRKVGGALIVIFGIHVSGLVPIHLLLGEKRLQVHRKPAGYLGSFLVGLAFAAGWTPCIGPILASILMVA
ATEETVTKGILLLFTYSMGLAIPFFLSSLAMHQFLTFFNRFKKHIRILEIVTGLFLVVVGVMIFTNYLSVLSRYTMKWFG
GM

Sequences:

>Translated_242_residues
MESTNITFVGAFVAGLLSFLSPCVLPLIPSFITYITGLSFADIQSEHPTHKVRQQTIVHSLLFIAGFTFVFVLLGASATF
IGGFLHEHMNVIRKVGGALIVIFGIHVSGLVPIHLLLGEKRLQVHRKPAGYLGSFLVGLAFAAGWTPCIGPILASILMVA
ATEETVTKGILLLFTYSMGLAIPFFLSSLAMHQFLTFFNRFKKHIRILEIVTGLFLVVVGVMIFTNYLSVLSRYTMKWFG
GM
>Mature_242_residues
MESTNITFVGAFVAGLLSFLSPCVLPLIPSFITYITGLSFADIQSEHPTHKVRQQTIVHSLLFIAGFTFVFVLLGASATF
IGGFLHEHMNVIRKVGGALIVIFGIHVSGLVPIHLLLGEKRLQVHRKPAGYLGSFLVGLAFAAGWTPCIGPILASILMVA
ATEETVTKGILLLFTYSMGLAIPFFLSSLAMHQFLTFFNRFKKHIRILEIVTGLFLVVVGVMIFTNYLSVLSRYTMKWFG
GM

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 26554; Mature: 26554

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]