Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is resA [H]
Identifier: 39996423
GI number: 39996423
Start: 1447467
End: 1447973
Strand: Direct
Name: resA [H]
Synonym: GSU1321
Alternate gene names: 39996423
Gene position: 1447467-1447973 (Clockwise)
Preceding gene: 39996422
Following gene: 39996424
Centisome position: 37.95
GC content: 61.34
Gene sequence:
>507_bases ATGAGAAAATTTGTCCGCCTTCTGCCTCTGTTGATCCTGCTGGCGCTCCTGGGCTGCTCCAAGGAGCAGAAGCCCGCCGT GCAGGGAAACCCCGCCCCCGACTTCACCCTCAACACCCTCAAGGGTGAGGTTGTGAAGCTGTCCGACCTGAAGGGGCAGG TGGTTCTCGTCAACTTCTGGGCCACCTGGTGCCCCCCCTGCCGGGAGGAGATCCCCTCCATGATGCGGCTTGAGGCAGCC ATGGCCGGCAAGCCGTTCAAGATGCTCTGCATCTCCATCGACGACGGCGGGCCGGTGGCGGTGGAGGATTTCTTCCGCAA GACGGGCTTTAATCTGCCCACGCTGATGGACACCGACAAGCAAGCCAGTAAACTCTACGGCGTCACCGGCGTGCCGGAGA CGTTTGTGGTGGATAAAAATGGGGTTATACTCAAGAAGGTCGTGGGGGGCGTGCAGTGGGACCACCCCGACGTGATCGCC TATCTCAACGGCGCCCTGGCCAAGTAG
Upstream 100 bases:
>100_bases ACTGGAATCAGAGTTCGGCGGCGCGCTTTCTTCGCATTCCGCGCCATACACTCATCTACAGGATGGAGAAGTATCAGATC ACTGCACCGGAGAGAAAAAA
Downstream 100 bases:
>100_bases GGCACCCCGCCAAGTCGAGGTATTCATGGAATCAACCAACATAACCTTTGTGGGCGCATTCGTGGCGGGACTCCTGTCCT TCCTGTCCCCCTGCGTGCTG
Product: thioredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRKFVRLLPLLILLALLGCSKEQKPAVQGNPAPDFTLNTLKGEVVKLSDLKGQVVLVNFWATWCPPCREEIPSMMRLEAA MAGKPFKMLCISIDDGGPVAVEDFFRKTGFNLPTLMDTDKQASKLYGVTGVPETFVVDKNGVILKKVVGGVQWDHPDVIA YLNGALAK
Sequences:
>Translated_168_residues MRKFVRLLPLLILLALLGCSKEQKPAVQGNPAPDFTLNTLKGEVVKLSDLKGQVVLVNFWATWCPPCREEIPSMMRLEAA MAGKPFKMLCISIDDGGPVAVEDFFRKTGFNLPTLMDTDKQASKLYGVTGVPETFVVDKNGVILKKVVGGVQWDHPDVIA YLNGALAK >Mature_168_residues MRKFVRLLPLLILLALLGCSKEQKPAVQGNPAPDFTLNTLKGEVVKLSDLKGQVVLVNFWATWCPPCREEIPSMMRLEAA MAGKPFKMLCISIDDGGPVAVEDFFRKTGFNLPTLMDTDKQASKLYGVTGVPETFVVDKNGVILKKVVGGVQWDHPDVIA YLNGALAK
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788523, Length=166, Percent_Identity=30.7228915662651, Blast_Score=67, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 18402; Mature: 18402
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFVRLLPLLILLALLGCSKEQKPAVQGNPAPDFTLNTLKGEVVKLSDLKGQVVLVNFW CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEEC ATWCPPCREEIPSMMRLEAAMAGKPFKMLCISIDDGGPVAVEDFFRKTGFNLPTLMDTDK CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCH QASKLYGVTGVPETFVVDKNGVILKKVVGGVQWDHPDVIAYLNGALAK HHHHHCCCCCCCCEEEECCCCEEHHHHHCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MRKFVRLLPLLILLALLGCSKEQKPAVQGNPAPDFTLNTLKGEVVKLSDLKGQVVLVNFW CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEEC ATWCPPCREEIPSMMRLEAAMAGKPFKMLCISIDDGGPVAVEDFFRKTGFNLPTLMDTDK CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCH QASKLYGVTGVPETFVVDKNGVILKKVVGGVQWDHPDVIAYLNGALAK HHHHHCCCCCCCCEEEECCCCEEHHHHHCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715; 12637552 [H]