Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39996425

Identifier: 39996425

GI number: 39996425

Start: 1448729

End: 1449172

Strand: Direct

Name: 39996425

Synonym: GSU1323

Alternate gene names: NA

Gene position: 1448729-1449172 (Clockwise)

Preceding gene: 39996424

Following gene: 39996428

Centisome position: 37.98

GC content: 64.41

Gene sequence:

>444_bases
GTGGCCGGAGCCTCCGTCTCAATCCAACTGGCGGTGGCCGACCTGGACGCCACCGAAGCCTTTTACGTGGGAATCCTCGA
ACTGGACGTGAACCGCGCGCTCACCGCGCGGGGCGCGCCCGAGCACCTGGAGTTGCGCAGCGGCGACTGGGAGATCATCT
TCGTGGATGAGTCTGCCGTGGTCCAGGCCCACCCTTTCCTGGGCGAGCGCCTGGAGGAGTACCCCAAGGGCGTGGGGATG
ACGATCCATGTGCAGGTGCAGGGGATAGAGGATATCTTCGACGCGGTGGTGGAGGAGGGGCTCGACGTGGTCTATCCCCT
GGAGGAAAAGCCTTACGGCGTCAAACAGTTCTGGTGCTTCGACCCGGACGGTTACCTGCTGGTGGTGGAGGAGCCGCACC
GGTCGCGCAGGGCCAACAGCGTGCGGAAAAATAAAGGGGCGTGA

Upstream 100 bases:

>100_bases
GTCACCGGGCTTTTCCTTGTTGTCGTCGGCGTGATGATTTTCACCAATTACCTGAGCGTCCTTTCCCGCTACACCATGAA
GTGGTTCGGGGGAATGTAGG

Downstream 100 bases:

>100_bases
TCACTCACGCCCCTTTGTTGTCCTTCTTCTCGTTCTTCCCGCCGGGAGAACAGGTGTCCGCCATTCAGGTCGGTACCCCG
AGCCGGGGCAGGATGAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAGASVSIQLAVADLDATEAFYVGILELDVNRALTARGAPEHLELRSGDWEIIFVDESAVVQAHPFLGERLEEYPKGVGM
TIHVQVQGIEDIFDAVVEEGLDVVYPLEEKPYGVKQFWCFDPDGYLLVVEEPHRSRRANSVRKNKGA

Sequences:

>Translated_147_residues
MAGASVSIQLAVADLDATEAFYVGILELDVNRALTARGAPEHLELRSGDWEIIFVDESAVVQAHPFLGERLEEYPKGVGM
TIHVQVQGIEDIFDAVVEEGLDVVYPLEEKPYGVKQFWCFDPDGYLLVVEEPHRSRRANSVRKNKGA
>Mature_146_residues
AGASVSIQLAVADLDATEAFYVGILELDVNRALTARGAPEHLELRSGDWEIIFVDESAVVQAHPFLGERLEEYPKGVGMT
IHVQVQGIEDIFDAVVEEGLDVVYPLEEKPYGVKQFWCFDPDGYLLVVEEPHRSRRANSVRKNKGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16327; Mature: 16195

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGASVSIQLAVADLDATEAFYVGILELDVNRALTARGAPEHLELRSGDWEIIFVDESAV
CCCCCEEEEEEEEECCCCCEEEEEEEEEECCCEEECCCCCCEEEEECCCEEEEEECCCCE
VQAHPFLGERLEEYPKGVGMTIHVQVQGIEDIFDAVVEEGLDVVYPLEEKPYGVKQFWCF
EEECCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEE
DPDGYLLVVEEPHRSRRANSVRKNKGA
CCCCEEEEEECCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
AGASVSIQLAVADLDATEAFYVGILELDVNRALTARGAPEHLELRSGDWEIIFVDESAV
CCCCEEEEEEEEECCCCCEEEEEEEEEECCCEEECCCCCCEEEEECCCEEEEEECCCCE
VQAHPFLGERLEEYPKGVGMTIHVQVQGIEDIFDAVVEEGLDVVYPLEEKPYGVKQFWCF
EEECCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEE
DPDGYLLVVEEPHRSRRANSVRKNKGA
CCCCEEEEEECCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA