| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995624
Identifier: 39995624
GI number: 39995624
Start: 550546
End: 551760
Strand: Reverse
Name: 39995624
Synonym: GSU0517
Alternate gene names: NA
Gene position: 551760-550546 (Counterclockwise)
Preceding gene: 39995625
Following gene: 39995623
Centisome position: 14.47
GC content: 64.61
Gene sequence:
>1215_bases ATGCCGCTCTTTCTCGCGGTAAAAAATGACGATGTCCTTAGCCGCCGGGGAACCGCGGACTTCCTGGAAGGGATGCGCCG CGACCTCTTCGCCAGACTCAAGAGCCTCCCCCCCGGCGGCGAATGCCGTTTGCTCAAGGGAGTGACCGAAGCCCTCGACA AAGAGCTCGCCTTCGAGGATGCCTTCGGCCAGGACTTTCCCCGTCTGCTTGCCGAGACTGAAACAGCCACCGACGTGAAC GGCCTCATCGACCTTCAACGGCAACTGGCGGAGAAGGCAGCCGAATACTTTCGCCAACGCGGCTCGGTGCCGGCCTTCGA CATCCTCTGTACCACCATGACGGACTACCTGACACGGAGAGCGCTCCAGCTCGCTTTCCGCTGGATGGAAGAGCACGGTC CGGCAGCTCCGGCTGTCGGCTGGGCCTGGCTCGCCCTGGGCGCCTTGGGGCGCGGCGAAGCGGGCCTTTCGGGAGCAGCG GACTTTGCCGTCATCCACGACGGGGAGGCCCCCGAAGAGACCTCGTTCTTCGTGGGCCTGGCCGGACGGGCTGCCGGCAT CCTGGAACGATTGGGCCTTGCCAGCCCCGGCGGAGTCACTCCGGTCGGCGCAGCATGGCGGGGAAGCATGACCGATTGGC GCAAACGGATCACCAGCCGGGTTACGGAAGGGGACGGCGACCTGGGATGGCTTATCGGGCTCACCGATTTGCGCTGCGTA GCCGGCGACTCCGCCCTGGCCGAGGGAATGAACAACCTGGTCCGGTCCATGCTCGCCTTTCACAGGGACCAGTTCCGGGA GACGGCACGGCACATATCCATGATGCCCTCGGGATTCGACTTTTTCGGCAGATTCAGGACGGAGCGGATTGGTGAGTCGC GGGGAATGTTCAACCTGGGCTACTACGGCATCTCCCCCCTGGTAGCCAACGTCAGGGTTCTGGCGGTCCACGCGGAGATA CCGGAAACGGGCACCATCGAGCGCATCCGGGCACTGCTCCGGAAGGGGCACATGGATGTGGATCTGGCCGAGCGGTTGCT GCGCGCCTGCCACTGCTTCGGCCGGAGGCGCGCCGCCATGGGCGGTGAGGCCTCCGGCATTTACGTGGATACGGCGAGAC TGACCGAGCAGGAGGAAGATGAACTCAAGGCAGGCATCGAAGCGGTGGGGACTCTTCAGCGGCTGGTCTACACCACCATT ACCGGGCAGGGATAG
Upstream 100 bases:
>100_bases CGTGTCGCTGCTCACGCCGCCGCCCCCAGAAGCGGTGCGTCGCTTCCTGGCTGAACAGGTTCACGGCCACATGGACTGAC GCACGGAACAAGGAGACGCC
Downstream 100 bases:
>100_bases ACACGATGCGGATCTCTCTTTCCACCGGCACGCTCTTCACCTTTCCCCTGGGGAAAGTCATGCGGATCGCCCGGGAAGCG GGATTCGACGGCGTCGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; Nucleotidyltransferase Family
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MPLFLAVKNDDVLSRRGTADFLEGMRRDLFARLKSLPPGGECRLLKGVTEALDKELAFEDAFGQDFPRLLAETETATDVN GLIDLQRQLAEKAAEYFRQRGSVPAFDILCTTMTDYLTRRALQLAFRWMEEHGPAAPAVGWAWLALGALGRGEAGLSGAA DFAVIHDGEAPEETSFFVGLAGRAAGILERLGLASPGGVTPVGAAWRGSMTDWRKRITSRVTEGDGDLGWLIGLTDLRCV AGDSALAEGMNNLVRSMLAFHRDQFRETARHISMMPSGFDFFGRFRTERIGESRGMFNLGYYGISPLVANVRVLAVHAEI PETGTIERIRALLRKGHMDVDLAERLLRACHCFGRRRAAMGGEASGIYVDTARLTEQEEDELKAGIEAVGTLQRLVYTTI TGQG
Sequences:
>Translated_404_residues MPLFLAVKNDDVLSRRGTADFLEGMRRDLFARLKSLPPGGECRLLKGVTEALDKELAFEDAFGQDFPRLLAETETATDVN GLIDLQRQLAEKAAEYFRQRGSVPAFDILCTTMTDYLTRRALQLAFRWMEEHGPAAPAVGWAWLALGALGRGEAGLSGAA DFAVIHDGEAPEETSFFVGLAGRAAGILERLGLASPGGVTPVGAAWRGSMTDWRKRITSRVTEGDGDLGWLIGLTDLRCV AGDSALAEGMNNLVRSMLAFHRDQFRETARHISMMPSGFDFFGRFRTERIGESRGMFNLGYYGISPLVANVRVLAVHAEI PETGTIERIRALLRKGHMDVDLAERLLRACHCFGRRRAAMGGEASGIYVDTARLTEQEEDELKAGIEAVGTLQRLVYTTI TGQG >Mature_403_residues PLFLAVKNDDVLSRRGTADFLEGMRRDLFARLKSLPPGGECRLLKGVTEALDKELAFEDAFGQDFPRLLAETETATDVNG LIDLQRQLAEKAAEYFRQRGSVPAFDILCTTMTDYLTRRALQLAFRWMEEHGPAAPAVGWAWLALGALGRGEAGLSGAAD FAVIHDGEAPEETSFFVGLAGRAAGILERLGLASPGGVTPVGAAWRGSMTDWRKRITSRVTEGDGDLGWLIGLTDLRCVA GDSALAEGMNNLVRSMLAFHRDQFRETARHISMMPSGFDFFGRFRTERIGESRGMFNLGYYGISPLVANVRVLAVHAEIP ETGTIERIRALLRKGHMDVDLAERLLRACHCFGRRRAAMGGEASGIYVDTARLTEQEEDELKAGIEAVGTLQRLVYTTIT GQG
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44214; Mature: 44083
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLFLAVKNDDVLSRRGTADFLEGMRRDLFARLKSLPPGGECRLLKGVTEALDKELAFED CCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AFGQDFPRLLAETETATDVNGLIDLQRQLAEKAAEYFRQRGSVPAFDILCTTMTDYLTRR HHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ALQLAFRWMEEHGPAAPAVGWAWLALGALGRGEAGLSGAADFAVIHDGEAPEETSFFVGL HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEE AGRAAGILERLGLASPGGVTPVGAAWRGSMTDWRKRITSRVTEGDGDLGWLIGLTDLRCV HHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH AGDSALAEGMNNLVRSMLAFHRDQFRETARHISMMPSGFDFFGRFRTERIGESRGMFNLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEC YYGISPLVANVRVLAVHAEIPETGTIERIRALLRKGHMDVDLAERLLRACHCFGRRRAAM HHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GGEASGIYVDTARLTEQEEDELKAGIEAVGTLQRLVYTTITGQG CCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PLFLAVKNDDVLSRRGTADFLEGMRRDLFARLKSLPPGGECRLLKGVTEALDKELAFED CEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AFGQDFPRLLAETETATDVNGLIDLQRQLAEKAAEYFRQRGSVPAFDILCTTMTDYLTRR HHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ALQLAFRWMEEHGPAAPAVGWAWLALGALGRGEAGLSGAADFAVIHDGEAPEETSFFVGL HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEE AGRAAGILERLGLASPGGVTPVGAAWRGSMTDWRKRITSRVTEGDGDLGWLIGLTDLRCV HHHHHHHHHHHCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH AGDSALAEGMNNLVRSMLAFHRDQFRETARHISMMPSGFDFFGRFRTERIGESRGMFNLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEC YYGISPLVANVRVLAVHAEIPETGTIERIRALLRKGHMDVDLAERLLRACHCFGRRRAAM HHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC GGEASGIYVDTARLTEQEEDELKAGIEAVGTLQRLVYTTITGQG CCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA