| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is actP [H]
Identifier: 39995625
GI number: 39995625
Start: 551782
End: 553305
Strand: Reverse
Name: actP [H]
Synonym: GSU0518
Alternate gene names: 39995625
Gene position: 553305-551782 (Counterclockwise)
Preceding gene: 39995626
Following gene: 39995624
Centisome position: 14.51
GC content: 65.35
Gene sequence:
>1524_bases ATGACTGACGCGAATCTCGTCCCCCTCCTTATCGTGACGGCTGCCCTGGCCACCTTCATCATTACCGGGCTGCGGGCACG GGCGCGGGAAGCGGGAGACTACGGCTTCGGCGGGCGCTACATCGGCCGGATCGGCGGGGGTGCCGCCATTGCCAGCAACT GGATGAGCGCGGCCAGCTTCCTGGGCATGGGCGGCCTTCTCTACCTCCAGGGCTACTACGCCCTTGCGTACGTCATAGGC TGGACCGGCGGCTACGTGCTGCTGCTGGTCCTCATGGCCGGCCAGATTCGCCGCTTCGGCAAGTACACGGCCCCGGACTT CGTGGGGGACCGGTATGCGTCGCCGGGCGCGCGCCTCATCTCGGCGGCCATTTCCATTACTATTTCGGTGATCTACTGCA CGGCTCAGTTCAAGGGAATCGGCATGCTCTTCGGCTGGCTCTTCGCCACCGACTACCGCACCGGAGTCATTCTGGGCGCC ACCGTGGCGGTGGGGTACGTAATTCTTTCGGGAATGCTGGGGGTGGCCCGCAACCAGCAGCTCCAGTACACCCTGCTCAT TGTCTCGTTCATCCTCCCTCTCATGGCCCTGGCTCATAAGCTCGGCTACTTCTGGGTACTCCCCCAGTTCGGCTACGGCG TTGCCATCCAGGACCTCAAGCGCGAGTTCGGCATCAACTTCGCAGCCCCCTTCGCCTCGGCCGGCCTCTTCCAGTGGGTG GCCCTCTGCTTCACCCTTATGGTTGGCACCGCCGGTCTTCCCCACGTCCTGTCGCGCTTCTACGTGGTCCCAAACATTCG CGACGCCCGGTGGAGCCTGGTCTGGGGCCTGTTCTTCATCGCTCTCATCTACTGGTCGGCTCCCGCCTACGCCGTCTTCG CCCGGCTGCTGGAGGCCCGCTCCGGCATGGCCCCCCCGCCGGTGGCCGCCGGCAAGATGGCCGACATCATCGTGATCAAG ACCGCAGTCATGGGAGGGCTTCCCTCCTGGATGATCGGCATCCTGGCCGCCGGCGCCATGAGCGCCGCCTTTTTCACAGT GGCGGGACTGCTCATCACCGGCGCGGCATCCCTTTCCCACGATATCTATTACCGCCTCATCAACCCCCGTGCCTCCGAGG GTTCCAAGATGGCCCTGGCCAAGGGTGCGGTGGTGGTCCTTGCGGCGATCGTCCTGGCCATCGCACTGAACCCGCCAGGG CTCATCGCCGAGATCACGGCCGTCGCCTTCGCCCTGGCCGGCAACACGATCTTCCCCGCCTTTCTCCTGGGAATCTGGTG GAGCCGCGCCAACCGCCACGGTGTCATCGCCGGAATGCTGACCGGCGTCCTCATCACCTTCTCCACCCCCCTGTTCGGTG GCCTGGTACCGGCGGTGGCGAAGGTCTTCCCCCTCACCTCATCGGCCCTGATCGGCGCGCCGCTGGTGATAGGAGTCATG ATTGTCGTGTCGCTGCTCACGCCGCCGCCCCCAGAAGCGGTGCGTCGCTTCCTGGCTGAACAGGTTCACGGCCACATGGA CTGA
Upstream 100 bases:
>100_bases GGCCAGTTCCTCCCCCTCTGGTTCATCATTCTTTGCGTCCTCTTCAACATCTACATAGACCGGCACACCGAGCAGCACAG CCGCAGGAGGGACCGCAGCC
Downstream 100 bases:
>100_bases CGCACGGAACAAGGAGACGCCATGCCGCTCTTTCTCGCGGTAAAAAATGACGATGTCCTTAGCCGCCGGGGAACCGCGGA CTTCCTGGAAGGGATGCGCC
Product: sodium/solute symporter
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTDANLVPLLIVTAALATFIITGLRARAREAGDYGFGGRYIGRIGGGAAIASNWMSAASFLGMGGLLYLQGYYALAYVIG WTGGYVLLLVLMAGQIRRFGKYTAPDFVGDRYASPGARLISAAISITISVIYCTAQFKGIGMLFGWLFATDYRTGVILGA TVAVGYVILSGMLGVARNQQLQYTLLIVSFILPLMALAHKLGYFWVLPQFGYGVAIQDLKREFGINFAAPFASAGLFQWV ALCFTLMVGTAGLPHVLSRFYVVPNIRDARWSLVWGLFFIALIYWSAPAYAVFARLLEARSGMAPPPVAAGKMADIIVIK TAVMGGLPSWMIGILAAGAMSAAFFTVAGLLITGAASLSHDIYYRLINPRASEGSKMALAKGAVVVLAAIVLAIALNPPG LIAEITAVAFALAGNTIFPAFLLGIWWSRANRHGVIAGMLTGVLITFSTPLFGGLVPAVAKVFPLTSSALIGAPLVIGVM IVVSLLTPPPPEAVRRFLAEQVHGHMD
Sequences:
>Translated_507_residues MTDANLVPLLIVTAALATFIITGLRARAREAGDYGFGGRYIGRIGGGAAIASNWMSAASFLGMGGLLYLQGYYALAYVIG WTGGYVLLLVLMAGQIRRFGKYTAPDFVGDRYASPGARLISAAISITISVIYCTAQFKGIGMLFGWLFATDYRTGVILGA TVAVGYVILSGMLGVARNQQLQYTLLIVSFILPLMALAHKLGYFWVLPQFGYGVAIQDLKREFGINFAAPFASAGLFQWV ALCFTLMVGTAGLPHVLSRFYVVPNIRDARWSLVWGLFFIALIYWSAPAYAVFARLLEARSGMAPPPVAAGKMADIIVIK TAVMGGLPSWMIGILAAGAMSAAFFTVAGLLITGAASLSHDIYYRLINPRASEGSKMALAKGAVVVLAAIVLAIALNPPG LIAEITAVAFALAGNTIFPAFLLGIWWSRANRHGVIAGMLTGVLITFSTPLFGGLVPAVAKVFPLTSSALIGAPLVIGVM IVVSLLTPPPPEAVRRFLAEQVHGHMD >Mature_506_residues TDANLVPLLIVTAALATFIITGLRARAREAGDYGFGGRYIGRIGGGAAIASNWMSAASFLGMGGLLYLQGYYALAYVIGW TGGYVLLLVLMAGQIRRFGKYTAPDFVGDRYASPGARLISAAISITISVIYCTAQFKGIGMLFGWLFATDYRTGVILGAT VAVGYVILSGMLGVARNQQLQYTLLIVSFILPLMALAHKLGYFWVLPQFGYGVAIQDLKREFGINFAAPFASAGLFQWVA LCFTLMVGTAGLPHVLSRFYVVPNIRDARWSLVWGLFFIALIYWSAPAYAVFARLLEARSGMAPPPVAAGKMADIIVIKT AVMGGLPSWMIGILAAGAMSAAFFTVAGLLITGAASLSHDIYYRLINPRASEGSKMALAKGAVVVLAAIVLAIALNPPGL IAEITAVAFALAGNTIFPAFLLGIWWSRANRHGVIAGMLTGVLITFSTPLFGGLVPAVAKVFPLTSSALIGAPLVIGVMI VVSLLTPPPPEAVRRFLAEQVHGHMD
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=502, Percent_Identity=24.3027888446215, Blast_Score=75, Evalue=2e-13, Organism=Escherichia coli, GI1790503, Length=438, Percent_Identity=30.8219178082192, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1787251, Length=499, Percent_Identity=26.25250501002, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI87082237, Length=437, Percent_Identity=24.4851258581236, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 53698; Mature: 53566
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDANLVPLLIVTAALATFIITGLRARAREAGDYGFGGRYIGRIGGGAAIASNWMSAASF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHH LGMGGLLYLQGYYALAYVIGWTGGYVLLLVLMAGQIRRFGKYTAPDFVGDRYASPGARLI HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH SAAISITISVIYCTAQFKGIGMLFGWLFATDYRTGVILGATVAVGYVILSGMLGVARNQQ HHHHHHHHHEEEEEHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC LQYTLLIVSFILPLMALAHKLGYFWVLPQFGYGVAIQDLKREFGINFAAPFASAGLFQWV HHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH ALCFTLMVGTAGLPHVLSRFYVVPNIRDARWSLVWGLFFIALIYWSAPAYAVFARLLEAR HHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SGMAPPPVAAGKMADIIVIKTAVMGGLPSWMIGILAAGAMSAAFFTVAGLLITGAASLSH CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIYYRLINPRASEGSKMALAKGAVVVLAAIVLAIALNPPGLIAEITAVAFALAGNTIFPA HHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH FLLGIWWSRANRHGVIAGMLTGVLITFSTPLFGGLVPAVAKVFPLTSSALIGAPLVIGVM HHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IVVSLLTPPPPEAVRRFLAEQVHGHMD HHHHHCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDANLVPLLIVTAALATFIITGLRARAREAGDYGFGGRYIGRIGGGAAIASNWMSAASF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHH LGMGGLLYLQGYYALAYVIGWTGGYVLLLVLMAGQIRRFGKYTAPDFVGDRYASPGARLI HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH SAAISITISVIYCTAQFKGIGMLFGWLFATDYRTGVILGATVAVGYVILSGMLGVARNQQ HHHHHHHHHEEEEEHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC LQYTLLIVSFILPLMALAHKLGYFWVLPQFGYGVAIQDLKREFGINFAAPFASAGLFQWV HHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH ALCFTLMVGTAGLPHVLSRFYVVPNIRDARWSLVWGLFFIALIYWSAPAYAVFARLLEAR HHHHHHHHCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH SGMAPPPVAAGKMADIIVIKTAVMGGLPSWMIGILAAGAMSAAFFTVAGLLITGAASLSH CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIYYRLINPRASEGSKMALAKGAVVVLAAIVLAIALNPPGLIAEITAVAFALAGNTIFPA HHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH FLLGIWWSRANRHGVIAGMLTGVLITFSTPLFGGLVPAVAKVFPLTSSALIGAPLVIGVM HHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IVVSLLTPPPPEAVRRFLAEQVHGHMD HHHHHCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA