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The map label for this gene is 39995623

Identifier: 39995623

GI number: 39995623

Start: 549749

End: 550540

Strand: Reverse

Name: 39995623

Synonym: GSU0516

Alternate gene names: NA

Gene position: 550540-549749 (Counterclockwise)

Preceding gene: 39995624

Following gene: 39995621

Centisome position: 14.43

GC content: 59.09

Gene sequence:

>792_bases
ATGCGGATCTCTCTTTCCACCGGCACGCTCTTCACCTTTCCCCTGGGGAAAGTCATGCGGATCGCCCGGGAAGCGGGATT
CGACGGCGTCGAGCTCATCATCAACCAGGACTTTCAGAAGGTCAACTGTCGCAAACTCATTGAAGAACTGGCCGAAATCC
TCCCCATCAACTCCATCCACGCCCCATTCATGCCTCTTGACGGATGGGGCGGCCCCATCGACTCCCTGGAGCGTTGCGTG
GAACTGGCGGCGGGCGCGGGAATACCGCTCGTCAACTTCCATCCCCCCTCGTGGATGGGATTCGAGATCGGCTTCTGGCG
CTGGCTCTACCGGGTGATGGACTTCCAGAAAGAGGTGGGGCGGGAAACGGTCATCGTGACCCTGGAGAACATGCCGTGGG
TGGGAACCCGCTTCCGGGTGAACCCTCACATCCTCTCGAATACCGAGAAACTGATCGAATTTATCCAGGAGCGCAATCTC
TACATGACCTTCGACACCACCCACATGGGATCGGGCAAGGCCAACTTCATCAATGACTTCTACCACTGCTACAATTCGGG
CCGCATCAGGAACATCCACTTCTCCGACTACGGCCACGGCAGGGAACACCTGATCCCCGGCCACGGCATCCTTCCACTCA
CCCGCTTCCTCAATCACCTGAGGAGCACCGACTACGCCGATACGCTCACCCTGGAGCTCTCGCCTGAGGAATTCCCCCGG
GACGAGCGGATCATAGTGGAGAGCCTCAGGGAAATCCTCCAGTACCTTCGCCGGGAAACATCCCCCGCCTGA

Upstream 100 bases:

>100_bases
TGACCGAGCAGGAGGAAGATGAACTCAAGGCAGGCATCGAAGCGGTGGGGACTCTTCAGCGGCTGGTCTACACCACCATT
ACCGGGCAGGGATAGACACG

Downstream 100 bases:

>100_bases
GTCCGCCAAACTGAAACAAGCACCGTGAAAACTCGGCCGGGCAAGGACGGATTTTGTCGGCCGCACGGTTCCGGGGACCG
GAGGTGCGGCGAACTGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein TIM Barrel; AP Endonuclease Family 2 Protein; Xylose Isomerase-Like TIM Barrel; TIM Alpha/Beta-Barrel Protein; Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; Endonuclease IV

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MRISLSTGTLFTFPLGKVMRIAREAGFDGVELIINQDFQKVNCRKLIEELAEILPINSIHAPFMPLDGWGGPIDSLERCV
ELAAGAGIPLVNFHPPSWMGFEIGFWRWLYRVMDFQKEVGRETVIVTLENMPWVGTRFRVNPHILSNTEKLIEFIQERNL
YMTFDTTHMGSGKANFINDFYHCYNSGRIRNIHFSDYGHGREHLIPGHGILPLTRFLNHLRSTDYADTLTLELSPEEFPR
DERIIVESLREILQYLRRETSPA

Sequences:

>Translated_263_residues
MRISLSTGTLFTFPLGKVMRIAREAGFDGVELIINQDFQKVNCRKLIEELAEILPINSIHAPFMPLDGWGGPIDSLERCV
ELAAGAGIPLVNFHPPSWMGFEIGFWRWLYRVMDFQKEVGRETVIVTLENMPWVGTRFRVNPHILSNTEKLIEFIQERNL
YMTFDTTHMGSGKANFINDFYHCYNSGRIRNIHFSDYGHGREHLIPGHGILPLTRFLNHLRSTDYADTLTLELSPEEFPR
DERIIVESLREILQYLRRETSPA
>Mature_263_residues
MRISLSTGTLFTFPLGKVMRIAREAGFDGVELIINQDFQKVNCRKLIEELAEILPINSIHAPFMPLDGWGGPIDSLERCV
ELAAGAGIPLVNFHPPSWMGFEIGFWRWLYRVMDFQKEVGRETVIVTLENMPWVGTRFRVNPHILSNTEKLIEFIQERNL
YMTFDTTHMGSGKANFINDFYHCYNSGRIRNIHFSDYGHGREHLIPGHGILPLTRFLNHLRSTDYADTLTLELSPEEFPR
DERIIVESLREILQYLRRETSPA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30408; Mature: 30408

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISLSTGTLFTFPLGKVMRIAREAGFDGVELIINQDFQKVNCRKLIEELAEILPINSIH
CEEECCCCCEEECCHHHHHHHHHHCCCCCEEEEECCCCHHCHHHHHHHHHHHHCCCCCCC
APFMPLDGWGGPIDSLERCVELAAGAGIPLVNFHPPSWMGFEIGFWRWLYRVMDFQKEVG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
RETVIVTLENMPWVGTRFRVNPHILSNTEKLIEFIQERNLYMTFDTTHMGSGKANFINDF
CCEEEEEECCCCCCCEEEEECCHHHCCHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHH
YHCYNSGRIRNIHFSDYGHGREHLIPGHGILPLTRFLNHLRSTDYADTLTLELSPEEFPR
HHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECHHHCCC
DERIIVESLREILQYLRRETSPA
CHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRISLSTGTLFTFPLGKVMRIAREAGFDGVELIINQDFQKVNCRKLIEELAEILPINSIH
CEEECCCCCEEECCHHHHHHHHHHCCCCCEEEEECCCCHHCHHHHHHHHHHHHCCCCCCC
APFMPLDGWGGPIDSLERCVELAAGAGIPLVNFHPPSWMGFEIGFWRWLYRVMDFQKEVG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
RETVIVTLENMPWVGTRFRVNPHILSNTEKLIEFIQERNLYMTFDTTHMGSGKANFINDF
CCEEEEEECCCCCCCEEEEECCHHHCCHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHH
YHCYNSGRIRNIHFSDYGHGREHLIPGHGILPLTRFLNHLRSTDYADTLTLELSPEEFPR
HHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECHHHCCC
DERIIVESLREILQYLRRETSPA
CHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA