| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39995400
Identifier: 39995400
GI number: 39995400
Start: 320502
End: 321560
Strand: Reverse
Name: 39995400
Synonym: GSU0291
Alternate gene names: NA
Gene position: 321560-320502 (Counterclockwise)
Preceding gene: 39995402
Following gene: 39995397
Centisome position: 8.43
GC content: 66.01
Gene sequence:
>1059_bases ATGAGCCCGCACCACACCCCGCTCCACCCTTGTTTCGATCCGGCCGAGACCTCAAACGAACTATCACGGCTTCTCGTCTC AGGCCCTATCGTCGACGCCGACCTCGACCGGCGCATCGCCCGTCTCCGGGAACGGTTCCGCATCTACTGCGGCATCTATC CCTTCGGCATGTGGGACAGCGGGCTCGTGGTCACGCGGGAGATGCGTGCCCTGACCGATCTTCTTCTGCCCCTCGCGGAA ATACTGCCGGCATTTTCCCGGCTTTTCAGACTGACGCTCCGGTTCCCCCCCCTTCTGGAAGCGACCCCACTGACAACCGC CTGCTCGTGGCTCGACCTGCTCGAACGGCTCGACGTCTCCGCAGCCCGGGGGAACCCGGCCCGACTTCTTGAACAGTTGG CCGGGGATGGCGCGAGGCGCACGAGCTTCGTATTTTCCCTCTTCATCCCCCGCCACTACGGTGGCGGCTTCGACCGCTAC CCGGACCAGACCGCCTTTCTGAAGCGATGGATAAGACAGCGGGGCACCCCGGAAGGGGGTATCTTCTCCGTGCTCGATGC TGCTTGCGGTTGCGGTGAAGGGACTTACGCCCTGGCTCGTCTCCTGATGGGGATGGGCGTTGCGCCGGACCGCTTCCGCG TGCTCGGCAGCTCCCTCGAAGAGATCGAGCTCTTTGCGGCCCGCCACGCATTTTTCCCCCACGATCAACGGCGCGGGGAA GTCCTGCGGAGCTTTGCCGCGCCGCTTCTCGCCGCAGGAGCGGCGACGTCCATCGGGTTCGTGCGCGAGGATATCAGGGA GGCGACAGGAGGGGCCTGGGACGTGATTCTCTGTAACGGTATTCTGGGAGGACCGTTCATCCACGACCGGCAGACGCTTG AGCGCACGATCGCACGACTTGCGGCCCGCCTGGCTCCGGGCGGACTCATTGTGGCGGCCGACCGGTTCCACGAGGGATGG AAGCGGCGGGTCCCCGCCGCCATGCTGGAAGAGATGCTGCGCGGCGCGGGGCTCACCGTACTCACCGTGGGGGAGGGCGT TGCCGGGGTCAGGCCCTGA
Upstream 100 bases:
>100_bases CGTCACTAGAATGAATGTCCACAGCCGTTGCAGCATTATCACCTCAGGCATCCCTCGTGCGCTGGACAGACACGTCAGGG CCGGCTAGAATCTCCCGACC
Downstream 100 bases:
>100_bases TGAGGATCCCCCCCCAGGAAAGCCCGCCGCCGAACCCCATCATGAGAACGAGTTCCCCCGGCTTGATGGTGCCATTGCGC AGGTATTCGTCCAGCGCGAG
Product: chemotaxis protein CheR
Products: NA
Alternate protein names: MCP Methyltransferase CheR-Type
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSPHHTPLHPCFDPAETSNELSRLLVSGPIVDADLDRRIARLRERFRIYCGIYPFGMWDSGLVVTREMRALTDLLLPLAE ILPAFSRLFRLTLRFPPLLEATPLTTACSWLDLLERLDVSAARGNPARLLEQLAGDGARRTSFVFSLFIPRHYGGGFDRY PDQTAFLKRWIRQRGTPEGGIFSVLDAACGCGEGTYALARLLMGMGVAPDRFRVLGSSLEEIELFAARHAFFPHDQRRGE VLRSFAAPLLAAGAATSIGFVREDIREATGGAWDVILCNGILGGPFIHDRQTLERTIARLAARLAPGGLIVAADRFHEGW KRRVPAAMLEEMLRGAGLTVLTVGEGVAGVRP
Sequences:
>Translated_352_residues MSPHHTPLHPCFDPAETSNELSRLLVSGPIVDADLDRRIARLRERFRIYCGIYPFGMWDSGLVVTREMRALTDLLLPLAE ILPAFSRLFRLTLRFPPLLEATPLTTACSWLDLLERLDVSAARGNPARLLEQLAGDGARRTSFVFSLFIPRHYGGGFDRY PDQTAFLKRWIRQRGTPEGGIFSVLDAACGCGEGTYALARLLMGMGVAPDRFRVLGSSLEEIELFAARHAFFPHDQRRGE VLRSFAAPLLAAGAATSIGFVREDIREATGGAWDVILCNGILGGPFIHDRQTLERTIARLAARLAPGGLIVAADRFHEGW KRRVPAAMLEEMLRGAGLTVLTVGEGVAGVRP >Mature_351_residues SPHHTPLHPCFDPAETSNELSRLLVSGPIVDADLDRRIARLRERFRIYCGIYPFGMWDSGLVVTREMRALTDLLLPLAEI LPAFSRLFRLTLRFPPLLEATPLTTACSWLDLLERLDVSAARGNPARLLEQLAGDGARRTSFVFSLFIPRHYGGGFDRYP DQTAFLKRWIRQRGTPEGGIFSVLDAACGCGEGTYALARLLMGMGVAPDRFRVLGSSLEEIELFAARHAFFPHDQRRGEV LRSFAAPLLAAGAATSIGFVREDIREATGGAWDVILCNGILGGPFIHDRQTLERTIARLAARLAPGGLIVAADRFHEGWK RRVPAAMLEEMLRGAGLTVLTVGEGVAGVRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38742; Mature: 38611
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPHHTPLHPCFDPAETSNELSRLLVSGPIVDADLDRRIARLRERFRIYCGIYPFGMWDS CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC GLVVTREMRALTDLLLPLAEILPAFSRLFRLTLRFPPLLEATPLTTACSWLDLLERLDVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC AARGNPARLLEQLAGDGARRTSFVFSLFIPRHYGGGFDRYPDQTAFLKRWIRQRGTPEGG CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCH IFSVLDAACGCGEGTYALARLLMGMGVAPDRFRVLGSSLEEIELFAARHAFFPHDQRRGE HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH VLRSFAAPLLAAGAATSIGFVREDIREATGGAWDVILCNGILGGPFIHDRQTLERTIARL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH AARLAPGGLIVAADRFHEGWKRRVPAAMLEEMLRGAGLTVLTVGEGVAGVRP HHHHCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCC >Mature Secondary Structure SPHHTPLHPCFDPAETSNELSRLLVSGPIVDADLDRRIARLRERFRIYCGIYPFGMWDS CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC GLVVTREMRALTDLLLPLAEILPAFSRLFRLTLRFPPLLEATPLTTACSWLDLLERLDVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC AARGNPARLLEQLAGDGARRTSFVFSLFIPRHYGGGFDRYPDQTAFLKRWIRQRGTPEGG CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCH IFSVLDAACGCGEGTYALARLLMGMGVAPDRFRVLGSSLEEIELFAARHAFFPHDQRRGE HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH VLRSFAAPLLAAGAATSIGFVREDIREATGGAWDVILCNGILGGPFIHDRQTLERTIARL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH AARLAPGGLIVAADRFHEGWKRRVPAAMLEEMLRGAGLTVLTVGEGVAGVRP HHHHCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA