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The map label for this gene is 39995397

Identifier: 39995397

GI number: 39995397

Start: 318413

End: 319033

Strand: Reverse

Name: 39995397

Synonym: GSU0288

Alternate gene names: NA

Gene position: 319033-318413 (Counterclockwise)

Preceding gene: 39995400

Following gene: 39995394

Centisome position: 8.36

GC content: 63.77

Gene sequence:

>621_bases
TTGCTCAGTTGTTCCAACTCTGGTACTAATGCCCCTGACATGAAGGCACAGGTTTCAATGACACGACGCGAAGAACTTAT
TGCTCTCCTGAAGGACCCCGCCGAAGAGGTTCGCGAAGCGGCGGCCAGGGCCATCGAGCGGATCGAGGGTGCAGGCAGCT
TTGCCGAGGTTATCGAGCAGCTGAAAAAAGGGAATCGCGGCGCCAAGATACGAGCCATCTATGCCCTGGGAAGGATCGGG
GGCGAACGAGTGCTTACTCCTCTCATGTACTGCGCCATGCGACCGGAGGAGGACATCCGGATCGCCGCCATCGACGTCCT
CGGCACCCTGGCCACCCCCCAGGCCTTCCCTCTGCTCGCCGAATGCCTGCGCGAGCCGTCGGCTGCGGTTCAGGCCAAAG
CCATCGAGGCTCTGGGCAGGTACCGGACCACGGAGGCCATTCGCCTTATCCTGCCGTTCCTTGACGCCCGGGACGGCTTC
CTCGATGCCGAGGCGGCCCGAGCGGTCGGCAACATCGGCTCAGCAGACCATGAGGGGAAACTCCTCGCGCTCCTCTCCTC
CCCCCATCCGGCGACCCGTGCAGCAGCGGCCGAAGCCTTGGGCACCCTCCCCTTCGAGTGA

Upstream 100 bases:

>100_bases
GAGAGAAGCGCAGCCTTGATGTTCAGTTTCATAGAGTTTATCCTTCCGGGACCCGGGAATCCACGGCCTTGCACAGCACC
ATTCTCGGGTATAATATCAA

Downstream 100 bases:

>100_bases
TTACAAAGGTCAGCCGAGATAGCGGTTGACGTCAATTGCGGTCATCAGCGGATCAACGACCGAAACAATGCGCGTGCCCG
TCTCCCGTGCCAGGTTCTTC

Product: PBS lyase

Products: NA

Alternate protein names: HEAT-Like Repeat-Containing Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; Peptidase; Signal Transduction Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLSCSNSGTNAPDMKAQVSMTRREELIALLKDPAEEVREAAARAIERIEGAGSFAEVIEQLKKGNRGAKIRAIYALGRIG
GERVLTPLMYCAMRPEEDIRIAAIDVLGTLATPQAFPLLAECLREPSAAVQAKAIEALGRYRTTEAIRLILPFLDARDGF
LDAEAARAVGNIGSADHEGKLLALLSSPHPATRAAAAEALGTLPFE

Sequences:

>Translated_206_residues
MLSCSNSGTNAPDMKAQVSMTRREELIALLKDPAEEVREAAARAIERIEGAGSFAEVIEQLKKGNRGAKIRAIYALGRIG
GERVLTPLMYCAMRPEEDIRIAAIDVLGTLATPQAFPLLAECLREPSAAVQAKAIEALGRYRTTEAIRLILPFLDARDGF
LDAEAARAVGNIGSADHEGKLLALLSSPHPATRAAAAEALGTLPFE
>Mature_206_residues
MLSCSNSGTNAPDMKAQVSMTRREELIALLKDPAEEVREAAARAIERIEGAGSFAEVIEQLKKGNRGAKIRAIYALGRIG
GERVLTPLMYCAMRPEEDIRIAAIDVLGTLATPQAFPLLAECLREPSAAVQAKAIEALGRYRTTEAIRLILPFLDARDGF
LDAEAARAVGNIGSADHEGKLLALLSSPHPATRAAAAEALGTLPFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21977; Mature: 21977

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSCSNSGTNAPDMKAQVSMTRREELIALLKDPAEEVREAAARAIERIEGAGSFAEVIEQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LKKGNRGAKIRAIYALGRIGGERVLTPLMYCAMRPEEDIRIAAIDVLGTLATPQAFPLLA
HHCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCHHHHHHH
ECLREPSAAVQAKAIEALGRYRTTEAIRLILPFLDARDGFLDAEAARAVGNIGSADHEGK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCC
LLALLSSPHPATRAAAAEALGTLPFE
EEEEECCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSCSNSGTNAPDMKAQVSMTRREELIALLKDPAEEVREAAARAIERIEGAGSFAEVIEQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LKKGNRGAKIRAIYALGRIGGERVLTPLMYCAMRPEEDIRIAAIDVLGTLATPQAFPLLA
HHCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCHHHHHHH
ECLREPSAAVQAKAIEALGRYRTTEAIRLILPFLDARDGFLDAEAARAVGNIGSADHEGK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCC
LLALLSSPHPATRAAAAEALGTLPFE
EEEEECCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA