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The map label for this gene is sun [C]

Identifier: 38233907

GI number: 38233907

Start: 1332549

End: 1334006

Strand: Reverse

Name: sun [C]

Synonym: DIP1321

Alternate gene names: 38233907

Gene position: 1334006-1332549 (Counterclockwise)

Preceding gene: 38233908

Following gene: 38233906

Centisome position: 53.6

GC content: 49.31

Gene sequence:

>1458_bases
ATGAGTGGTGGTTTTCGTTCCCGTTCGCGCTCAGGCGACCATCTTCCCGTACGTAGTGAAAAGAAGCAATCTACAAATAG
GTCTCGCCAACCAAAGAGATCATCGCAATCAGATCCGCGATGGAAGCCGCTTAGAGGAATTGACCTACCGCGGTCAGTTG
CTTTTTGGGTAATTCAACGAGTTGAAATAGATGCAGCATATGCGAATCTCACCCTTCCTAAAGTTCTCAAACAGTCGAAG
CTTTCTGGTCGCGATGCGGCATTTGCTACGGAGTTAACCTACGGCACTTTAAGAACACAAGGTGTTCTCGATACCGTGAT
CGCAGAATGTTCTTCACGGGAACTTGAAGCTTTAAAACCGGAAGTGCGGGCAGCGCTGCGCCTAGGCGCCTATCAGCTTT
TATACACACGGGTAGGTGCTCATGCAGCTGTAGATACAACCGTTCGAATCATGGAAGCAATCGGTCAAGATCGTGCAAAA
GGATTTGTCAACGGTGTTCTCCGTACAATTTCAAGAACTTCTCCTCAATCGTGGATCGAAAAATTAACTCCATCGGGTGA
GGTTGAGTCAATTGCCTTTCAGCATGCACACCCCGCTTGGATTGCTCGAAGTTTTTCCCAGATAGTTGGAATGAACGAGC
TGGAGGCTGCATTATCAGCAGATTCTGAGCGTCCAAAGGTGCACTTGGTAGCACGCCCAGGGGAGATGAGTGCAGAAGAA
CTTGCGCTTATTGTTGGAGGCGATGAAGGTAAGTATTCTCCCTATGCTGTTTACCTAGAATCTGGTGATCCAGGAGCGCT
GGAACCAGTTCGTGAAGGTTTGGCTGCGGTCCAAGATGAAGGCAGTCAACTAATTGCGAGAGCAGTGACCGAGGCTCCAA
TACATGGAGAAGATCAAGGAAAATGGCTTGATCTGTGTGCTGGTCCCGGCGGGAAAGCAGCATTACTTGGCGCAATTGCA
CGTATTGACGGTGCGACAGTGGATGCTGTCGAAGTGAGCAAGCACCGTGCGAAGTTGATCGAAAACATTGTTCGCGGTTT
GCCCGTCAAAGTTACAGTAGGTGACGGACGCTCCCCAGGATTGGCGCCAGGATATGACCGAGTATTAGTTGATGCACCAT
GTTCTGGACTAGGAGCATTACGACGCCGCCCTGAAGCGCGGTGGCGAAAACAAGAAACTGACATTGAGGAACTGACAAAG
CTGCAATCGCAGTTGCTCGAATCGGCTTTACGGCTTGTACGAACTGGTGGAATCGTTGTCTACTCAACGTGTTCCCCAGA
TTTAAGGGAAACACGACAGATTGTGGATCGAATACTTCGTTCTCACGAAGTTGAAGAGCTTAACGCTGCGGAGCTCGTTC
CCAGTATGGAAAACACTGGTGAATACAAGTCGGTACACATGTGGCCACATCGACATGGCACAGATGCGATGTTTTTCGCA
GTGCTGCGTAAAAAATAA

Upstream 100 bases:

>100_bases
TTAATATTGAGCTTGACCAAATTCAGCCGCAAGGGAAGAAAAGAATGAAGGCATCTGATTGGGCTCGCGGATTGCAAAAC
ACAGAAGGCTTGGTGCTGTC

Downstream 100 bases:

>100_bases
CGAGATGGGGTAGCGTCGCGTCGAGCTTATGGTTTCCACGCTAGACTGAGGCTATGACTCAGACTCGACAGTGTCCGATT
ATTGCACCATCAATTTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSGGFRSRSRSGDHLPVRSEKKQSTNRSRQPKRSSQSDPRWKPLRGIDLPRSVAFWVIQRVEIDAAYANLTLPKVLKQSK
LSGRDAAFATELTYGTLRTQGVLDTVIAECSSRELEALKPEVRAALRLGAYQLLYTRVGAHAAVDTTVRIMEAIGQDRAK
GFVNGVLRTISRTSPQSWIEKLTPSGEVESIAFQHAHPAWIARSFSQIVGMNELEAALSADSERPKVHLVARPGEMSAEE
LALIVGGDEGKYSPYAVYLESGDPGALEPVREGLAAVQDEGSQLIARAVTEAPIHGEDQGKWLDLCAGPGGKAALLGAIA
RIDGATVDAVEVSKHRAKLIENIVRGLPVKVTVGDGRSPGLAPGYDRVLVDAPCSGLGALRRRPEARWRKQETDIEELTK
LQSQLLESALRLVRTGGIVVYSTCSPDLRETRQIVDRILRSHEVEELNAAELVPSMENTGEYKSVHMWPHRHGTDAMFFA
VLRKK

Sequences:

>Translated_485_residues
MSGGFRSRSRSGDHLPVRSEKKQSTNRSRQPKRSSQSDPRWKPLRGIDLPRSVAFWVIQRVEIDAAYANLTLPKVLKQSK
LSGRDAAFATELTYGTLRTQGVLDTVIAECSSRELEALKPEVRAALRLGAYQLLYTRVGAHAAVDTTVRIMEAIGQDRAK
GFVNGVLRTISRTSPQSWIEKLTPSGEVESIAFQHAHPAWIARSFSQIVGMNELEAALSADSERPKVHLVARPGEMSAEE
LALIVGGDEGKYSPYAVYLESGDPGALEPVREGLAAVQDEGSQLIARAVTEAPIHGEDQGKWLDLCAGPGGKAALLGAIA
RIDGATVDAVEVSKHRAKLIENIVRGLPVKVTVGDGRSPGLAPGYDRVLVDAPCSGLGALRRRPEARWRKQETDIEELTK
LQSQLLESALRLVRTGGIVVYSTCSPDLRETRQIVDRILRSHEVEELNAAELVPSMENTGEYKSVHMWPHRHGTDAMFFA
VLRKK
>Mature_484_residues
SGGFRSRSRSGDHLPVRSEKKQSTNRSRQPKRSSQSDPRWKPLRGIDLPRSVAFWVIQRVEIDAAYANLTLPKVLKQSKL
SGRDAAFATELTYGTLRTQGVLDTVIAECSSRELEALKPEVRAALRLGAYQLLYTRVGAHAAVDTTVRIMEAIGQDRAKG
FVNGVLRTISRTSPQSWIEKLTPSGEVESIAFQHAHPAWIARSFSQIVGMNELEAALSADSERPKVHLVARPGEMSAEEL
ALIVGGDEGKYSPYAVYLESGDPGALEPVREGLAAVQDEGSQLIARAVTEAPIHGEDQGKWLDLCAGPGGKAALLGAIAR
IDGATVDAVEVSKHRAKLIENIVRGLPVKVTVGDGRSPGLAPGYDRVLVDAPCSGLGALRRRPEARWRKQETDIEELTKL
QSQLLESALRLVRTGGIVVYSTCSPDLRETRQIVDRILRSHEVEELNAAELVPSMENTGEYKSVHMWPHRHGTDAMFFAV
LRKK

Specific function: May act as RNA methyltransferase [H]

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=211, Percent_Identity=31.7535545023697, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI76150623, Length=211, Percent_Identity=31.7535545023697, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI32698918, Length=191, Percent_Identity=30.8900523560209, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI11545785, Length=155, Percent_Identity=36.7741935483871, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI2367212, Length=440, Percent_Identity=32.9545454545455, Blast_Score=178, Evalue=6e-46,
Organism=Escherichia coli, GI87081985, Length=220, Percent_Identity=31.8181818181818, Blast_Score=86, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17536757, Length=208, Percent_Identity=31.7307692307692, Blast_Score=83, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6324268, Length=202, Percent_Identity=33.6633663366337, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI22024126, Length=215, Percent_Identity=30.2325581395349, Blast_Score=92, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 53078; Mature: 52947

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGFRSRSRSGDHLPVRSEKKQSTNRSRQPKRSSQSDPRWKPLRGIDLPRSVAFWVIQR
CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
VEIDAAYANLTLPKVLKQSKLSGRDAAFATELTYGTLRTQGVLDTVIAECSSRELEALKP
HHEHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EVRAALRLGAYQLLYTRVGAHAAVDTTVRIMEAIGQDRAKGFVNGVLRTISRTSPQSWIE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHH
KLTPSGEVESIAFQHAHPAWIARSFSQIVGMNELEAALSADSERPKVHLVARPGEMSAEE
HCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCC
LALIVGGDEGKYSPYAVYLESGDPGALEPVREGLAAVQDEGSQLIARAVTEAPIHGEDQG
EEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
KWLDLCAGPGGKAALLGAIARIDGATVDAVEVSKHRAKLIENIVRGLPVKVTVGDGRSPG
CEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
LAPGYDRVLVDAPCSGLGALRRRPEARWRKQETDIEELTKLQSQLLESALRLVRTGGIVV
CCCCCCEEEEECCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
YSTCSPDLRETRQIVDRILRSHEVEELNAAELVPSMENTGEYKSVHMWPHRHGTDAMFFA
EECCCCCHHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHH
VLRKK
HHHCC
>Mature Secondary Structure 
SGGFRSRSRSGDHLPVRSEKKQSTNRSRQPKRSSQSDPRWKPLRGIDLPRSVAFWVIQR
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
VEIDAAYANLTLPKVLKQSKLSGRDAAFATELTYGTLRTQGVLDTVIAECSSRELEALKP
HHEHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EVRAALRLGAYQLLYTRVGAHAAVDTTVRIMEAIGQDRAKGFVNGVLRTISRTSPQSWIE
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHH
KLTPSGEVESIAFQHAHPAWIARSFSQIVGMNELEAALSADSERPKVHLVARPGEMSAEE
HCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCC
LALIVGGDEGKYSPYAVYLESGDPGALEPVREGLAAVQDEGSQLIARAVTEAPIHGEDQG
EEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
KWLDLCAGPGGKAALLGAIARIDGATVDAVEVSKHRAKLIENIVRGLPVKVTVGDGRSPG
CEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
LAPGYDRVLVDAPCSGLGALRRRPEARWRKQETDIEELTKLQSQLLESALRLVRTGGIVV
CCCCCCEEEEECCCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
YSTCSPDLRETRQIVDRILRSHEVEELNAAELVPSMENTGEYKSVHMWPHRHGTDAMFFA
EECCCCCHHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHH
VLRKK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]