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The map label for this gene is 15897938

Identifier: 15897938

GI number: 15897938

Start: 928014

End: 928697

Strand: Reverse

Name: 15897938

Synonym: SSO1070

Alternate gene names: NA

Gene position: 928697-928014 (Counterclockwise)

Preceding gene: 15897939

Following gene: 15897935

Centisome position: 31.04

GC content: 44.44

Gene sequence:

>684_bases
ATGGTAAATAAGACTAAAGACACCTACAACCCCTTGAGAGAGCTCGTATCACTCTACCTCTTCATGAAGGATGCCCAAAC
AAAACAAGAGAACAGGTTAAGGAGAGCTCTCTTCCTCGTGAACGACGAGGAGAAGTTGAGCGAGGAGAGATTGGAGAAGT
TCTCTAAGGGAGACTTCTCTGACGTAAAACTGTATCAACTGGAATACACTGGTACAGTACTACGTGAGATTCAAGTCCTA
GCTAGGATACTACTTCAAACACGAGAAGAGTTGAAGGAGGTGGGGAAAATGATAGAGAGTAATGTGCCTCAAGACCACGT
GTTACTCACGATTCCCGGAATAGGGAAACTGGCAGCTGGGATTATAATTGGGATTGTGGGTGATATTAGGCGCTTCCCAA
GACCTGAATCCTTCGTTGCTTATTGCGGTTTAGACCCGGTGGTTGAGAGGAGTGGTAGGATTGAGGTTAGAAAGGGTATC
TCCAAGAGGGGTAACAAGTATTTGCGTAGCTTGTTTTATTTCCTTGCCGAGACTCAATATTCGCGTAACCCAACTCTCCT
TAAGTTCTACGAAACCCACAAGGACAAACTGAAGGGTAAGAAGTTGTACACTGCCTTAGCTAGGAAGTTGGCTAGGATAG
TGTGGAGTGTTTGGTACAATAATAAACCTTATGAGGTAAAGTGA

Upstream 100 bases:

>100_bases
CAATACTTCAAGGAGTGAAAGTCCTATTAGTCAGTCTTGCTATGGAAAGAAAAGGATGTAAGGGGAAAAAGATTTTTACG
ACGCAGAAAAACTTGAAAAC

Downstream 100 bases:

>100_bases
CACCCTAATCGCCACGCGGATCTCTTTCAATTTGCGTGGCAATTGTAACTTACACTATGCTCAAAATTCGACCGAAAGAT
TTATTACTGAACGCCCCTAT

Product: partial transposase ISC1229

Products: NA

Alternate protein names: Transposase ISC; Second ORF In Transposon ISC; ORF2 In Transposon ISC; Transposon ISC

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MVNKTKDTYNPLRELVSLYLFMKDAQTKQENRLRRALFLVNDEEKLSEERLEKFSKGDFSDVKLYQLEYTGTVLREIQVL
ARILLQTREELKEVGKMIESNVPQDHVLLTIPGIGKLAAGIIIGIVGDIRRFPRPESFVAYCGLDPVVERSGRIEVRKGI
SKRGNKYLRSLFYFLAETQYSRNPTLLKFYETHKDKLKGKKLYTALARKLARIVWSVWYNNKPYEVK

Sequences:

>Translated_227_residues
MVNKTKDTYNPLRELVSLYLFMKDAQTKQENRLRRALFLVNDEEKLSEERLEKFSKGDFSDVKLYQLEYTGTVLREIQVL
ARILLQTREELKEVGKMIESNVPQDHVLLTIPGIGKLAAGIIIGIVGDIRRFPRPESFVAYCGLDPVVERSGRIEVRKGI
SKRGNKYLRSLFYFLAETQYSRNPTLLKFYETHKDKLKGKKLYTALARKLARIVWSVWYNNKPYEVK
>Mature_227_residues
MVNKTKDTYNPLRELVSLYLFMKDAQTKQENRLRRALFLVNDEEKLSEERLEKFSKGDFSDVKLYQLEYTGTVLREIQVL
ARILLQTREELKEVGKMIESNVPQDHVLLTIPGIGKLAAGIIIGIVGDIRRFPRPESFVAYCGLDPVVERSGRIEVRKGI
SKRGNKYLRSLFYFLAETQYSRNPTLLKFYETHKDKLKGKKLYTALARKLARIVWSVWYNNKPYEVK

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26510; Mature: 26510

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKTKDTYNPLRELVSLYLFMKDAQTKQENRLRRALFLVNDEEKLSEERLEKFSKGDFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
DVKLYQLEYTGTVLREIQVLARILLQTREELKEVGKMIESNVPQDHVLLTIPGIGKLAAG
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH
IIIGIVGDIRRFPRPESFVAYCGLDPVVERSGRIEVRKGISKRGNKYLRSLFYFLAETQY
HHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SRNPTLLKFYETHKDKLKGKKLYTALARKLARIVWSVWYNNKPYEVK
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVNKTKDTYNPLRELVSLYLFMKDAQTKQENRLRRALFLVNDEEKLSEERLEKFSKGDFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
DVKLYQLEYTGTVLREIQVLARILLQTREELKEVGKMIESNVPQDHVLLTIPGIGKLAAG
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH
IIIGIVGDIRRFPRPESFVAYCGLDPVVERSGRIEVRKGISKRGNKYLRSLFYFLAETQY
HHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
SRNPTLLKFYETHKDKLKGKKLYTALARKLARIVWSVWYNNKPYEVK
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA