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The map label for this gene is yhbO [C]

Identifier: 15897935

GI number: 15897935

Start: 924674

End: 925195

Strand: Reverse

Name: yhbO [C]

Synonym: SSO1067

Alternate gene names: 15897935

Gene position: 925195-924674 (Counterclockwise)

Preceding gene: 15897938

Following gene: 15897931

Centisome position: 30.92

GC content: 35.44

Gene sequence:

>522_bases
ATGGACTCTAAAAAGGTATTATTCTTAGTTGGAGAAGAGTTTGAAGATATAGAGTTATTATATCCCTTCTATAGAGTTAT
GGAAGAGGGTTTCAAACCTGTAATAGCGTGGAAAGAGGCTAATAGTAAGGTTATCGGAAAGCATGGATATACTGTAATTT
CTGACATAGCATTTAAGGACGTAAGGCCGGAAGATTATATAGCATTAGTTATTCCAGGCGGAAGAGGCCCAGAGCATATA
AGAACATTAGAAGAAGTAAAGAATATTACGAGAAAGTTCTTTGAATTAAAGAAGCCAGTAGCTGCAATATGCCACGGTCC
TCAAATTTTAATCTCAGCTAATCTAGTAAAAGGAAGAAAACTAACGTCAGTTAACTCAATAAAAGATGATGTAATAGCAG
CGGGAGGAATTTACGTTGATAACGATGTAGTAGTAGATGAAAATCTAATATCATCTAGAGTCCCTAGTGATCTACCTGCT
TTTGCGTCCACTTTAATTAAGGCACTTAAGAGTATAAAGTAA

Upstream 100 bases:

>100_bases
AAATATGATTAAGGAACGATAAAACAAGAATGAGTTTTTAGAGTATAATAAAGTTTAGTTTTAGAAAGCTTTTTTATTAA
AATATAAGTTATATGCTATT

Downstream 100 bases:

>100_bases
TATTACTACTAAGCTTTTTCCCCTTCTTGATTTAATACTTCATTTATCTTTTTATTATATTTTTCAAGGATTTCTGAAAT
CTCCTTTTGTGCCTCCTCAT

Product: intracellular proteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MDSKKVLFLVGEEFEDIELLYPFYRVMEEGFKPVIAWKEANSKVIGKHGYTVISDIAFKDVRPEDYIALVIPGGRGPEHI
RTLEEVKNITRKFFELKKPVAAICHGPQILISANLVKGRKLTSVNSIKDDVIAAGGIYVDNDVVVDENLISSRVPSDLPA
FASTLIKALKSIK

Sequences:

>Translated_173_residues
MDSKKVLFLVGEEFEDIELLYPFYRVMEEGFKPVIAWKEANSKVIGKHGYTVISDIAFKDVRPEDYIALVIPGGRGPEHI
RTLEEVKNITRKFFELKKPVAAICHGPQILISANLVKGRKLTSVNSIKDDVIAAGGIYVDNDVVVDENLISSRVPSDLPA
FASTLIKALKSIK
>Mature_173_residues
MDSKKVLFLVGEEFEDIELLYPFYRVMEEGFKPVIAWKEANSKVIGKHGYTVISDIAFKDVRPEDYIALVIPGGRGPEHI
RTLEEVKNITRKFFELKKPVAAICHGPQILISANLVKGRKLTSVNSIKDDVIAAGGIYVDNDVVVDENLISSRVPSDLPA
FASTLIKALKSIK

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=169, Percent_Identity=41.4201183431953, Blast_Score=129, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17558714, Length=166, Percent_Identity=24.6987951807229, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: 3.2.-.-

Molecular weight: Translated: 19228; Mature: 19228

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSKKVLFLVGEEFEDIELLYPFYRVMEEGFKPVIAWKEANSKVIGKHGYTVISDIAFKD
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHCC
VRPEDYIALVIPGGRGPEHIRTLEEVKNITRKFFELKKPVAAICHGPQILISANLVKGRK
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
LTSVNSIKDDVIAAGGIYVDNDVVVDENLISSRVPSDLPAFASTLIKALKSIK
CCCHHHHHHHHEEECCEEECCCEEECCHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSKKVLFLVGEEFEDIELLYPFYRVMEEGFKPVIAWKEANSKVIGKHGYTVISDIAFKD
CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHCC
VRPEDYIALVIPGGRGPEHIRTLEEVKNITRKFFELKKPVAAICHGPQILISANLVKGRK
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
LTSVNSIKDDVIAAGGIYVDNDVVVDENLISSRVPSDLPAFASTLIKALKSIK
CCCHHHHHHHHEEECCEEECCCEEECCHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]