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The map label for this gene is yrkJ [H]

Identifier: 15925753

GI number: 15925753

Start: 53823

End: 54467

Strand: Direct

Name: yrkJ [H]

Synonym: SA0046

Alternate gene names: 15925753

Gene position: 53823-54467 (Clockwise)

Preceding gene: 15925752

Following gene: 15925755

Centisome position: 1.91

GC content: 32.87

Gene sequence:

>645_bases
ATGGATATAGCAAATATGACTATTATGTTGCTAATTGGCGTACTGGGTGGATTTATATCTGGATTAATAGGTATTGGGGG
CGCAATTATTATTTACCCAGCTATTCTTATATTGCCACCATTAATAGGTATACCTGCGTATAGTGCATATATTGCTTCGG
GACTTACCTCTAGTCAAGTATTTTTCAGTACACTTAGTGGATCATTAAATGCAAGAAAACAACCAGCTTTCTCTCCTAAA
CTTGTTATATATATGGGAGGGGGTATGTTGATTGGAAGCATGTTAGGGGCAATTTTAGCTAGTTTGTTTAATGCTACTTT
TGTAAATACGGTATATGTAATAATCGCCATACTTGCTTTAATATTGATGTTTATTAAAGTTAAACCTACTACACAAGAGA
CGAAATCTAAACCTTTGCTATTTATTATAGTTGGATTTGGAATTGGTGTAATTTCGGGAATTGTGGGTGCAGGTGGAGCA
TTTATCATCATTCCTGTATTATTAGCATTATTTAAATTACCAATGAATACGGTAGTGAACAATAGCATAGCAATTGCTTT
TATATCTTCAGTAGGGGCATTTTTTATAAAATTAATGCAAGGATATATACCAGTAGAAAGTGCAATTTTTTTGATAATTG
AATGA

Upstream 100 bases:

>100_bases
GTGAAAATTTAATAGAATGCGTTAAAACAGCAGAAGAAAATAATGAAAGTTCTCAAGAATTAATTAATGAAGCAGTTAAT
TTATTAGTTAAAAGTAAATA

Downstream 100 bases:

>100_bases
TGATCATTTTCTGAAAATATTATGTGGTCATATAATATAATGCCCATCATTTCACTAATCTCTTTTATTCTCTGAGTTAT
TTTGATATCTCCTGGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGIPAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPK
LVIYMGGGMLIGSMLGAILASLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGA
FIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE

Sequences:

>Translated_214_residues
MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGIPAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPK
LVIYMGGGMLIGSMLGAILASLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGA
FIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE
>Mature_214_residues
MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGIPAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPK
LVIYMGGGMLIGSMLGAILASLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGA
FIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 22360; Mature: 22360

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGIPAYSAYIASGLTSSQV
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH
FFSTLSGSLNARKQPAFSPKLVIYMGGGMLIGSMLGAILASLFNATFVNTVYVIIAILAL
HHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGAFIIIPVLLALFKLPMNTVVN
HHHHHHCCCCCHHHCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHC
NSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
>Mature Secondary Structure
MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGIPAYSAYIASGLTSSQV
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHH
FFSTLSGSLNARKQPAFSPKLVIYMGGGMLIGSMLGAILASLFNATFVNTVYVIIAILAL
HHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGAFIIIPVLLALFKLPMNTVVN
HHHHHHCCCCCHHHCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHC
NSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]