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The map label for this gene is yrkD [H]

Identifier: 15925752

GI number: 15925752

Start: 53563

End: 53823

Strand: Direct

Name: yrkD [H]

Synonym: SA0045

Alternate gene names: 15925752

Gene position: 53563-53823 (Clockwise)

Preceding gene: 15925748

Following gene: 15925753

Centisome position: 1.9

GC content: 24.9

Gene sequence:

>261_bases
ATGACTTATGATAAAAAAATGATTAATCGTATAAATAGAATACAAGGTCAATTAAATGGTGTCGTAAAAATGATGGAAGA
AGAAAAAGATTGCAAAGATATAATTACGCAACTTAGTGCATCTAAAGGTTCTATACAACGTTTAATGGGGATTATAATTA
GTGAAAATTTAATAGAATGCGTTAAAACAGCAGAAGAAAATAATGAAAGTTCTCAAGAATTAATTAATGAAGCAGTTAAT
TTATTAGTTAAAAGTAAATAA

Upstream 100 bases:

>100_bases
AAACGGATAGAATCATTTGCCAAATACCTATAGGGGTATTTGACAATTTTGTTTTAATTTATTATTATTAACTTAATCAA
TTTATGTGGAGGAAATGAAT

Downstream 100 bases:

>100_bases
TGGATATAGCAAATATGACTATTATGTTGCTAATTGGCGTACTGGGTGGATTTATATCTGGATTAATAGGTATTGGGGGC
GCAATTATTATTTACCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MTYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIECVKTAEENNESSQELINEAVN
LLVKSK

Sequences:

>Translated_86_residues
MTYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIECVKTAEENNESSQELINEAVN
LLVKSK
>Mature_85_residues
TYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIECVKTAEENNESSQELINEAVNL
LVKSK

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9742; Mature: 9611

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIEC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VKTAEENNESSQELINEAVNLLVKSK
HHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TYDKKMINRINRIQGQLNGVVKMMEEEKDCKDIITQLSASKGSIQRLMGIIISENLIEC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VKTAEENNESSQELINEAVNLLVKSK
HHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]