Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is comEB [H]
Identifier: 15675651
GI number: 15675651
Start: 1512115
End: 1512576
Strand: Reverse
Name: comEB [H]
Synonym: SPy_1823
Alternate gene names: 15675651
Gene position: 1512576-1512115 (Counterclockwise)
Preceding gene: 15675652
Following gene: 15675650
Centisome position: 81.65
GC content: 43.51
Gene sequence:
>462_bases ATGACAAATCGTTTATCATGGCAAGACTATTTTATGGCCAATGCAGAGCTGATTTCCAAGCGCTCTACCTGTGATCGCGC CTTTGTGGGAGCTGTTTTGGTAAAGGATAACCGCATTATTGCCACAGGTTACAATGGCGGAGTTTCTGCTACGGATAACT GCAACGAAGCGGGTCATTATATGGAAGACGGACATTGTATTCGCACTGTTCATGCTGAAATGAATGCTTTGATTCAATGT GCGAAAGAAGGAATTTCAACGGACGGAACTGAAATTTACGTGACTCATTTTCCTTGTATTAACTGCACTAAGGCGCTTTT GCAGGCGGGGATTACAAAGATTACCTATAAAGCACATTACCGTCCGCACCCCTTTGCCATTGAACTGATGGAGAAAAAAG GGGTTGCCTATGTGCAACATGATGTGCCTCAAATTGTTTTAGGAGGCGATAAGGAACAATAG
Upstream 100 bases:
>100_bases TTGGTTATCACAAAAACTGGTTGTCAAGTCTTGACCTTGGCACCCAAAGAATTAATTGTATTGTAAAAGAATGGTTCAGG AAAGGATTAGGGGAGAAGCA
Downstream 100 bases:
>100_bases AAAGTGTACCTAAAAGGACGGTCATAAAAGATTTGAGCCAAGGCCACTTTTGTGGTAAAATGAAGTGATAAATATTTTAG TAAGAGGTAATAATAATGAT
Product: putative DNA-binding late competence protein
Products: dUMP; NH3
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTNRLSWQDYFMANAELISKRSTCDRAFVGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQC AKEGISTDGTEIYVTHFPCINCTKALLQAGITKITYKAHYRPHPFAIELMEKKGVAYVQHDVPQIVLGGDKEQ
Sequences:
>Translated_153_residues MTNRLSWQDYFMANAELISKRSTCDRAFVGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQC AKEGISTDGTEIYVTHFPCINCTKALLQAGITKITYKAHYRPHPFAIELMEKKGVAYVQHDVPQIVLGGDKEQ >Mature_152_residues TNRLSWQDYFMANAELISKRSTCDRAFVGAVLVKDNRIIATGYNGGVSATDNCNEAGHYMEDGHCIRTVHAEMNALIQCA KEGISTDGTEIYVTHFPCINCTKALLQAGITKITYKAHYRPHPFAIELMEKKGVAYVQHDVPQIVLGGDKEQ
Specific function: Dispensable for transformability [H]
COG id: COG2131
COG function: function code F; Deoxycytidylate deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]
Homologues:
Organism=Homo sapiens, GI61742821, Length=117, Percent_Identity=35.042735042735, Blast_Score=65, Evalue=3e-11, Organism=Homo sapiens, GI61742819, Length=117, Percent_Identity=35.042735042735, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321938, Length=153, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=2e-19, Organism=Drosophila melanogaster, GI24667298, Length=158, Percent_Identity=35.4430379746835, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI24667302, Length=158, Percent_Identity=35.4430379746835, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016192 - InterPro: IPR002125 - InterPro: IPR013404 - InterPro: IPR015517 - InterPro: IPR016193 - InterPro: IPR016473 [H]
Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]
EC number: 3.5.4.12
Molecular weight: Translated: 16967; Mature: 16835
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00903 CYT_DCMP_DEAMINASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRLSWQDYFMANAELISKRSTCDRAFVGAVLVKDNRIIATGYNGGVSATDNCNEAGHY CCCCCCCHHHHHHHHHHHHCCCCCCHHHHEEEEEECCEEEEECCCCCCCCCCCCCCCCCC MEDGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGITKITYKAHY CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEECC RPHPFAIELMEKKGVAYVQHDVPQIVLGGDKEQ CCCCEEEEEECCCCCEEEECCCCEEEECCCCCC >Mature Secondary Structure TNRLSWQDYFMANAELISKRSTCDRAFVGAVLVKDNRIIATGYNGGVSATDNCNEAGHY CCCCCCHHHHHHHHHHHHCCCCCCHHHHEEEEEECCEEEEECCCCCCCCCCCCCCCCCC MEDGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGITKITYKAHY CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEECC RPHPFAIELMEKKGVAYVQHDVPQIVLGGDKEQ CCCCEEEEEECCCCCEEEECCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dCMP; H2O
Specific reaction: dCMP + H2O = dUMP + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7968523; 8969508; 9384377 [H]