Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is efp [H]
Identifier: 15675650
GI number: 15675650
Start: 1511462
End: 1512019
Strand: Reverse
Name: efp [H]
Synonym: SPy_1821
Alternate gene names: 15675650
Gene position: 1512019-1511462 (Counterclockwise)
Preceding gene: 15675651
Following gene: 15675649
Centisome position: 81.62
GC content: 40.86
Gene sequence:
>558_bases ATGATTGAAGCAAGTAAGCTTAAAGCAGGTATGACATTTGAAGCAGAAGGAAAATTAATCCGTGTCCTTGAAGCTAGCCA CCACAAACCAGGTAAAGGAAACACTATCATGCGTATGAAACTACGTGATGTGCGTACAGGTTCTACTTTTGACACAACTT ACCGCCCAGATGAAAAATTTGAGCAAGCCATCATTGAAACTGTCCCAGCACAATACCTATACAAAATGGATGACACTGCT TACTTCATGAACACTGACACTTATGATCAGTACGAAATTCCAGTTGCTAACGTTGAGCAAGAATTGCTTTACATTCTTGA AAACTCAGACGTGAAAATCCAATTTTATGGAAGTGAAGTGATTGGGGTAACGGTTCCAACAACTGTTGAATTGACCGTTG CGGAAACACAACCATCTATTAAAGGAGCGACAGTGACGGGTTCAGGGAAACCTGCAACTCTTGAGACAGGACTTGTTGTT AACGTTCCAGACTTTATCGAAGCTGGCCAAAAACTAATCATTAACACTGCAGAAGGTACTTACGTTTCTCGTGCTTAA
Upstream 100 bases:
>100_bases AATAGAAAGTGTACCTAAAAGGACGGTCATAAAAGATTTGAGCCAAGGCCACTTTTGTGGTAAAATGAAGTGATAAATAT TTTAGTAAGAGGTAATAATA
Downstream 100 bases:
>100_bases TCCTTTGTCAAAACAGATTAGTCTAAAAAAGAGAAAGGAAATGCTATGACAACTGAATATATCGGTGAAATCGTCATTTC ACCACGAGTGCTTGAGGTTA
Product: elongation factor P
Products: NA
Alternate protein names: EF-P [H]
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MIEASKLKAGMTFEAEGKLIRVLEASHHKPGKGNTIMRMKLRDVRTGSTFDTTYRPDEKFEQAIIETVPAQYLYKMDDTA YFMNTDTYDQYEIPVANVEQELLYILENSDVKIQFYGSEVIGVTVPTTVELTVAETQPSIKGATVTGSGKPATLETGLVV NVPDFIEAGQKLIINTAEGTYVSRA
Sequences:
>Translated_185_residues MIEASKLKAGMTFEAEGKLIRVLEASHHKPGKGNTIMRMKLRDVRTGSTFDTTYRPDEKFEQAIIETVPAQYLYKMDDTA YFMNTDTYDQYEIPVANVEQELLYILENSDVKIQFYGSEVIGVTVPTTVELTVAETQPSIKGATVTGSGKPATLETGLVV NVPDFIEAGQKLIINTAEGTYVSRA >Mature_185_residues MIEASKLKAGMTFEAEGKLIRVLEASHHKPGKGNTIMRMKLRDVRTGSTFDTTYRPDEKFEQAIIETVPAQYLYKMDDTA YFMNTDTYDQYEIPVANVEQELLYILENSDVKIQFYGSEVIGVTVPTTVELTVAETQPSIKGATVTGSGKPATLETGLVV NVPDFIEAGQKLIINTAEGTYVSRA
Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t
COG id: COG0231
COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the elongation factor P family [H]
Homologues:
Organism=Escherichia coli, GI1790590, Length=181, Percent_Identity=32.5966850828729, Blast_Score=113, Evalue=9e-27, Organism=Escherichia coli, GI87082061, Length=189, Percent_Identity=31.2169312169312, Blast_Score=104, Evalue=3e-24,
Paralogues:
None
Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015365 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR020599 - InterPro: IPR013185 - InterPro: IPR001059 - InterPro: IPR013852 - InterPro: IPR011768 - InterPro: IPR014722 - InterPro: IPR008991 [H]
Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]
EC number: NA
Molecular weight: Translated: 20468; Mature: 20468
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS01275 EFP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEASKLKAGMTFEAEGKLIRVLEASHHKPGKGNTIMRMKLRDVRTGSTFDTTYRPDEKF CCCCHHCCCCCEEECCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHH EQAIIETVPAQYLYKMDDTAYFMNTDTYDQYEIPVANVEQELLYILENSDVKIQFYGSEV HHHHHHHCCHHHEEEECCCEEEEECCCCCEEECCHHCCCCEEEEEEECCCEEEEEECCEE IGVTVPTTVELTVAETQPSIKGATVTGSGKPATLETGLVVNVPDFIEAGQKLIINTAEGT EEEECCCEEEEEEECCCCCCCCEEEECCCCCCEEECCEEEECHHHHHCCCEEEEECCCCC YVSRA EEECC >Mature Secondary Structure MIEASKLKAGMTFEAEGKLIRVLEASHHKPGKGNTIMRMKLRDVRTGSTFDTTYRPDEKF CCCCHHCCCCCEEECCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHH EQAIIETVPAQYLYKMDDTAYFMNTDTYDQYEIPVANVEQELLYILENSDVKIQFYGSEV HHHHHHHCCHHHEEEECCCEEEEECCCCCEEECCHHCCCCEEEEEEECCCEEEEEECCEE IGVTVPTTVELTVAETQPSIKGATVTGSGKPATLETGLVVNVPDFIEAGQKLIINTAEGT EEEECCCEEEEEEECCCCCCCCEEEECCCCCCEEECCEEEECHHHHHCCCEEEEECCCCC YVSRA EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA