Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is nusA [H]
Identifier: 15675574
GI number: 15675574
Start: 1428268
End: 1429425
Strand: Reverse
Name: nusA [H]
Synonym: SPy_1724
Alternate gene names: 15675574
Gene position: 1429425-1428268 (Counterclockwise)
Preceding gene: 15675575
Following gene: 15675573
Centisome position: 77.16
GC content: 40.24
Gene sequence:
>1158_bases ATGAGCAAAGAAATGCTAGAAGCCTTCCGTATTTTGGAAGAAGAAAAACACATTGATAAAGCAGATATTATTGACGCAGT GACAGAATCATTAAAGTCTGCCTATAAACGTCGCTATGGTCAATCAGAATCATGTGTTATTGAATTTAATGAAAAAACAG CTGATTTTCAAGTATTTACGGTTCGTGAGGTTGTTGAAGAAGTTTTTGACAGCCGGCTTGAGATTAGTTTGAAAGATGCT CTTGCTATCAGTTCTGCCTATGAATTGGGTGATAAGATTCGCTTTGAAGAATCTGTCAATGAATTTGGACGTGTCGCAGC TCAATCAGCTAAACAGACTATTATGGAAAAGATGCGCCGCCAAATGCGTGAAGTGATGTTCAATGAATACAAAGAGCATG AAGGTGAAATTATGACAGGAACAGTTGAACGGTTTGATCAACGTTTTATTTATGTCAATCTTGGTTCCTTAGAAGCACAA TTGTCTCACCAAGACCAGATTCCAGGTGAAACTTTCAAATCACATGACCGTATTGACGTTTATGTCTACAAAGTTGAAAA TAATCCTAAAGGAGTTAACGTCTTTGTTAGTCGTAGCCATCCAGAATTCATCAAACGTATTATGGAGCAAGAAATTCCTG AAGTCTTTGATGGTACTGTTGAAATCATGAGTGTTTCTCGTGAAGCAGGTGACCGCACCAAGGTTGCTGTGCGCAGTCAT AATCCTAACGTTGATGCCATCGGAACAATTGTTGGACGTGGTGGAAGTAATATTAAAAAGGTCATCAGCAAGTTCCATCC AAAACGTGTAGATGCTAAGACGGGGCTTGAAATTCCAGTTGAAGAAAATATTGACGTGATTCAATGGGTAGATGATCCAG CTGAGTTCATCTACAATGCCATTGCTCCGGCTGAAGTAGACATGGTACTTTTTGACGATGAAGATCTTAAACGTGCTACG GTAGTAGTTCCTGATAGCAAATTATCATTAGCTATCGGGCGTCGCGGCCAAAATGTTCGTTTAGCGGCACATTTGACTGG CTACCGTATTGATATCAAATCAGCTAGCGAATATGATCGTCTTGAGGCGGAAAAAGAAGCAGCAACAGCTGTGGAAGAGC CAGTTGTTGACGATGTTATGACTGCCGAGGAAGTATAA
Upstream 100 bases:
>100_bases AGCTAAACAAAAGGAATTAAGGGAGCCTTTAGGGGGCTATTGATCGTATTAATTTAAGAAAGGATTTTTGCCAAGCTTTA CAAGCAAGGTAGATAACATT
Downstream 100 bases:
>100_bases GAAAAGAGGTGTTTGATGTCTAAAGTCAAAAAAATACCTTTACGAAAATCACTTGTTTCTGGTGAAATTATTGCTAAACG AGATCTTCTTAGGATTGTAA
Product: transcription elongation factor NusA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MSKEMLEAFRILEEEKHIDKADIIDAVTESLKSAYKRRYGQSESCVIEFNEKTADFQVFTVREVVEEVFDSRLEISLKDA LAISSAYELGDKIRFEESVNEFGRVAAQSAKQTIMEKMRRQMREVMFNEYKEHEGEIMTGTVERFDQRFIYVNLGSLEAQ LSHQDQIPGETFKSHDRIDVYVYKVENNPKGVNVFVSRSHPEFIKRIMEQEIPEVFDGTVEIMSVSREAGDRTKVAVRSH NPNVDAIGTIVGRGGSNIKKVISKFHPKRVDAKTGLEIPVEENIDVIQWVDDPAEFIYNAIAPAEVDMVLFDDEDLKRAT VVVPDSKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEYDRLEAEKEAATAVEEPVVDDVMTAEEV
Sequences:
>Translated_385_residues MSKEMLEAFRILEEEKHIDKADIIDAVTESLKSAYKRRYGQSESCVIEFNEKTADFQVFTVREVVEEVFDSRLEISLKDA LAISSAYELGDKIRFEESVNEFGRVAAQSAKQTIMEKMRRQMREVMFNEYKEHEGEIMTGTVERFDQRFIYVNLGSLEAQ LSHQDQIPGETFKSHDRIDVYVYKVENNPKGVNVFVSRSHPEFIKRIMEQEIPEVFDGTVEIMSVSREAGDRTKVAVRSH NPNVDAIGTIVGRGGSNIKKVISKFHPKRVDAKTGLEIPVEENIDVIQWVDDPAEFIYNAIAPAEVDMVLFDDEDLKRAT VVVPDSKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEYDRLEAEKEAATAVEEPVVDDVMTAEEV >Mature_384_residues SKEMLEAFRILEEEKHIDKADIIDAVTESLKSAYKRRYGQSESCVIEFNEKTADFQVFTVREVVEEVFDSRLEISLKDAL AISSAYELGDKIRFEESVNEFGRVAAQSAKQTIMEKMRRQMREVMFNEYKEHEGEIMTGTVERFDQRFIYVNLGSLEAQL SHQDQIPGETFKSHDRIDVYVYKVENNPKGVNVFVSRSHPEFIKRIMEQEIPEVFDGTVEIMSVSREAGDRTKVAVRSHN PNVDAIGTIVGRGGSNIKKVISKFHPKRVDAKTGLEIPVEENIDVIQWVDDPAEFIYNAIAPAEVDMVLFDDEDLKRATV VVPDSKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEYDRLEAEKEAATAVEEPVVDDVMTAEEV
Specific function: Participates in both the termination and antitermination of transcription. Interacts with RNA polymerase and binds RNA [H]
COG id: COG0195
COG function: function code K; Transcription elongation factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
Organism=Escherichia coli, GI1789560, Length=369, Percent_Identity=33.3333333333333, Blast_Score=216, Evalue=3e-57,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1612 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004087 - InterPro: IPR015946 - InterPro: IPR009019 - InterPro: IPR004088 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR003029 - InterPro: IPR022967 - InterPro: IPR013735 - InterPro: IPR010213 [H]
Pfam domain/function: PF08529 NusA_N; PF00575 S1 [H]
EC number: NA
Molecular weight: Translated: 43748; Mature: 43617
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS50084 KH_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKEMLEAFRILEEEKHIDKADIIDAVTESLKSAYKRRYGQSESCVIEFNEKTADFQVFT CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEE VREVVEEVFDSRLEISLKDALAISSAYELGDKIRFEESVNEFGRVAAQSAKQTIMEKMRR HHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH QMREVMFNEYKEHEGEIMTGTVERFDQRFIYVNLGSLEAQLSHQDQIPGETFKSHDRIDV HHHHHHHHHHHHHCCCEEEHHHHHHCCEEEEEEECCHHHHHCCCCCCCCCHHCCCCCEEE YVYKVENNPKGVNVFVSRSHPEFIKRIMEQEIPEVFDGTVEIMSVSREAGDRTKVAVRSH EEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECC NPNVDAIGTIVGRGGSNIKKVISKFHPKRVDAKTGLEIPVEENIDVIQWVDDPAEFIYNA CCCCCCHHHEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH IAPAEVDMVLFDDEDLKRATVVVPDSKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEYDR CCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCEEEEEEEEEEEEEECCCCHHHH LEAEKEAATAVEEPVVDDVMTAEEV HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKEMLEAFRILEEEKHIDKADIIDAVTESLKSAYKRRYGQSESCVIEFNEKTADFQVFT CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEE VREVVEEVFDSRLEISLKDALAISSAYELGDKIRFEESVNEFGRVAAQSAKQTIMEKMRR HHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH QMREVMFNEYKEHEGEIMTGTVERFDQRFIYVNLGSLEAQLSHQDQIPGETFKSHDRIDV HHHHHHHHHHHHHCCCEEEHHHHHHCCEEEEEEECCHHHHHCCCCCCCCCHHCCCCCEEE YVYKVENNPKGVNVFVSRSHPEFIKRIMEQEIPEVFDGTVEIMSVSREAGDRTKVAVRSH EEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECC NPNVDAIGTIVGRGGSNIKKVISKFHPKRVDAKTGLEIPVEENIDVIQWVDDPAEFIYNA CCCCCCHHHEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHH IAPAEVDMVLFDDEDLKRATVVVPDSKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEYDR CCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCEEEEEEEEEEEEEECCCCHHHH LEAEKEAATAVEEPVVDDVMTAEEV HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8491709; 9384377 [H]