Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is ylxR [H]
Identifier: 15675573
GI number: 15675573
Start: 1427956
End: 1428252
Strand: Reverse
Name: ylxR [H]
Synonym: SPy_1723
Alternate gene names: 15675573
Gene position: 1428252-1427956 (Counterclockwise)
Preceding gene: 15675574
Following gene: 15675572
Centisome position: 77.1
GC content: 33.33
Gene sequence:
>297_bases ATGTCTAAAGTCAAAAAAATACCTTTACGAAAATCACTTGTTTCTGGTGAAATTATTGCTAAACGAGATCTTCTTAGGAT TGTAAAAACTAAGGATGGTCAAGTTTTCATTGATCCAACTGGTAAACAAAATGGTCGTGGTGCTTATATCAAATTAGACA ATCAAGAGGCCTTAATGGCCAAGAAAAAACAAGTTTTCAACAGGAGTTTCTCAATGGACATTCCAGAAAGTTTTTACGAT GACTTGATTGCTTATGTTGATCACAAAATCAAAAGAAGAGAGTTAGGTCTTGACTAA
Upstream 100 bases:
>100_bases TGATCGTCTTGAGGCGGAAAAAGAAGCAGCAACAGCTGTGGAAGAGCCAGTTGTTGACGATGTTATGACTGCCGAGGAAG TATAAGAAAAGAGGTGTTTG
Downstream 100 bases:
>100_bases TTTAGAAAGATTATCTAGTCTTATTGGTCCAGCTCAACGGGCTGGAAAAGTGATTTCAGGTGAAGAACTAGTAGTAAAAG CTATTCAACACCAGCAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSKVKKIPLRKSLVSGEIIAKRDLLRIVKTKDGQVFIDPTGKQNGRGAYIKLDNQEALMAKKKQVFNRSFSMDIPESFYD DLIAYVDHKIKRRELGLD
Sequences:
>Translated_98_residues MSKVKKIPLRKSLVSGEIIAKRDLLRIVKTKDGQVFIDPTGKQNGRGAYIKLDNQEALMAKKKQVFNRSFSMDIPESFYD DLIAYVDHKIKRRELGLD >Mature_97_residues SKVKKIPLRKSLVSGEIIAKRDLLRIVKTKDGQVFIDPTGKQNGRGAYIKLDNQEALMAKKKQVFNRSFSMDIPESFYDD LIAYVDHKIKRRELGLD
Specific function: Unknown
COG id: COG2740
COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007393 [H]
Pfam domain/function: PF04296 DUF448 [H]
EC number: NA
Molecular weight: Translated: 11267; Mature: 11136
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVKKIPLRKSLVSGEIIAKRDLLRIVKTKDGQVFIDPTGKQNGRGAYIKLDNQEALMA CCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCHHHHH KKKQVFNRSFSMDIPESFYDDLIAYVDHKIKRRELGLD HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKVKKIPLRKSLVSGEIIAKRDLLRIVKTKDGQVFIDPTGKQNGRGAYIKLDNQEALMA CCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCHHHHH KKKQVFNRSFSMDIPESFYDDLIAYVDHKIKRRELGLD HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8491709; 9384377 [H]