Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
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Accession | NC_002737 |
Length | 1,852,441 |
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The map label for this gene is dnaD [H]
Identifier: 15674948
GI number: 15674948
Start: 771726
End: 772409
Strand: Direct
Name: dnaD [H]
Synonym: SPy_0928
Alternate gene names: 15674948
Gene position: 771726-772409 (Clockwise)
Preceding gene: 15674947
Following gene: 15674949
Centisome position: 41.66
GC content: 35.53
Gene sequence:
>684_bases ATGAGTTTTTTAGAACATTATAAGTCAGGTAATTTGGTTATCCCAAGTGCCTTGCTTTTTCATTACAAAGATCTTTTTAA GAGCTCAGATGATTTTTTGGTCTGGCAGTTTTTCTATCTTCAAAATACGACAAAGCGAGACGACTTAGCACCCAGTCAAA TTGCTCATGCGCTTGGAAAATCAGTTGCTGATATTAATAAAATCATTTCATCTTTGACTAATCAAGGGCTTTTAGATATG CGGACAATTGAACTTACTGGAGAAATTGAAATTATTTTTGATGCGAGTCCTGTGTTAGCCAAGTTAGATCAATTGTTTGT CAGTCAAACGGCAACTGAAATTGACAAACAAGAAACACCAAATCATTTCAAACGATTAGTTGATGAATTTGAACGTGAAC TAGGACGATTCTTGAGTCCTTTTGAGTTAGAAGATCTTGAAAAAACGCTTCGTGATGATAAAACAGATCCTGATTTGATA CGAGAAGCTTTAAAAGAAGCTGTCTTCAACGGCAAAACAAATTGGAAATATATCCAGGCTATCTTACGTAATTGGCGAAA AGAAGGTATTGTTAATCTTCGACAAGTAGAAGAACGTAGACGTGTTAGAGAAGGCGAAGATCTTTCTCAAGTGACGATAT CAGAGGATTTTCTATCTGCGATGAATTTATGGAGTGATTCATGA
Upstream 100 bases:
>100_bases TAATGCAGTTTCCTGGGTAAACACATTAATCAGCATCTGATTAGGGGATTTAAAGTAGTAAAGGCTATAGATTCGATTTT AGCCTTTTGATTGAGGGATT
Downstream 100 bases:
>100_bases GAATTGGAAAAGCAAGATTAGCAAAAGTCCTGACCATCATTGGTCAAATGTTTCCTGAGGCTAAGGGAGAGTTAGACTGG GAAACACCTTTTCAATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSFLEHYKSGNLVIPSALLFHYKDLFKSSDDFLVWQFFYLQNTTKRDDLAPSQIAHALGKSVADINKIISSLTNQGLLDM RTIELTGEIEIIFDASPVLAKLDQLFVSQTATEIDKQETPNHFKRLVDEFERELGRFLSPFELEDLEKTLRDDKTDPDLI REALKEAVFNGKTNWKYIQAILRNWRKEGIVNLRQVEERRRVREGEDLSQVTISEDFLSAMNLWSDS
Sequences:
>Translated_227_residues MSFLEHYKSGNLVIPSALLFHYKDLFKSSDDFLVWQFFYLQNTTKRDDLAPSQIAHALGKSVADINKIISSLTNQGLLDM RTIELTGEIEIIFDASPVLAKLDQLFVSQTATEIDKQETPNHFKRLVDEFERELGRFLSPFELEDLEKTLRDDKTDPDLI REALKEAVFNGKTNWKYIQAILRNWRKEGIVNLRQVEERRRVREGEDLSQVTISEDFLSAMNLWSDS >Mature_226_residues SFLEHYKSGNLVIPSALLFHYKDLFKSSDDFLVWQFFYLQNTTKRDDLAPSQIAHALGKSVADINKIISSLTNQGLLDMR TIELTGEIEIIFDASPVLAKLDQLFVSQTATEIDKQETPNHFKRLVDEFERELGRFLSPFELEDLEKTLRDDKTDPDLIR EALKEAVFNGKTNWKYIQAILRNWRKEGIVNLRQVEERRRVREGEDLSQVTISEDFLSAMNLWSDS
Specific function: Probable component of primosome involved in the initiation of DNA replication [H]
COG id: COG3935
COG function: function code L; Putative primosome component and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006343 [H]
Pfam domain/function: PF07261 DnaB_2 [H]
EC number: NA
Molecular weight: Translated: 26374; Mature: 26243
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLEHYKSGNLVIPSALLFHYKDLFKSSDDFLVWQFFYLQNTTKRDDLAPSQIAHALGK CCHHHHHCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH SVADINKIISSLTNQGLLDMRTIELTGEIEIIFDASPVLAKLDQLFVSQTATEIDKQETP HHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC NHFKRLVDEFERELGRFLSPFELEDLEKTLRDDKTDPDLIREALKEAVFNGKTNWKYIQA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHH ILRNWRKEGIVNLRQVEERRRVREGEDLSQVTISEDFLSAMNLWSDS HHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFLEHYKSGNLVIPSALLFHYKDLFKSSDDFLVWQFFYLQNTTKRDDLAPSQIAHALGK CHHHHHCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH SVADINKIISSLTNQGLLDMRTIELTGEIEIIFDASPVLAKLDQLFVSQTATEIDKQETP HHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC NHFKRLVDEFERELGRFLSPFELEDLEKTLRDDKTDPDLIREALKEAVFNGKTNWKYIQA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHH ILRNWRKEGIVNLRQVEERRRVREGEDLSQVTISEDFLSAMNLWSDS HHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704260; 8760912; 9384377 [H]