Click here to switch to the map view.

The map label for this gene is atpF

Identifier: 15674804

GI number: 15674804

Start: 615599

End: 616093

Strand: Direct

Name: atpF

Synonym: SPy_0756

Alternate gene names: 15674804

Gene position: 615599-616093 (Clockwise)

Preceding gene: 15674803

Following gene: 15674805

Centisome position: 33.23

GC content: 38.38

Gene sequence:

>495_bases
ATGTCAATCACATTTGGTGAACTCGTTGGGAATTTTATTCTAGTAACAGGTTCTGTAATCGTCTTGTTACTCTTGATCAA
AAAATTCGCTTGGGGTGCGATTGAATCGATTTTACAGACACGCTCACAACAAATCTCTCGAGATATTGATCAGGCTGAGC
AATCACGTCTAAGTGCTCAACAGTTAGAGGCAAAAAGTCAAGCTAACCTAGATGCTAGTCGTTTACAAGCAAGTAAAATC
ATTAGTGATGCCAAAGAAATTGGTCAATTACAAGGTGATAAATTGGTGGCAGAAGCTACTGATGAAGCAAAACGCTTGAA
AGAAAAAGCGTTGACAGATATTGAACAAAGCAAATCAGACGCTATTTCAGCAGTCAAAACAGAAATGTCTGATTTAACGG
TTCTTTTAGCGGAAAAAATTATGGGAGCCAATCTTGATAAGACGGCGCAAAGCCAGCTTATTGACAGTTATCTTGATGAC
TTAGGAGAAGCTTAA

Upstream 100 bases:

>100_bases
TTATTTCCTGCATACAGGCTTTCGTTTTCACAAAACTGACAGCGACCTATCTAGGAAAGAAAGTCAATGAATCAGAAGAA
TAAGGAAGGAGAACAAACGA

Downstream 100 bases:

>100_bases
TGACCAAAAAAGAACAGGCTCTTATCGAGCAATATGCAAAAAGCCTTGTTGAGGTGGCGAGTGAACATCATTCTCTTGAT
GCCTTACAAGCTGATGTGCT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSITFGELVGNFILVTGSVIVLLLLIKKFAWGAIESILQTRSQQISRDIDQAEQSRLSAQQLEAKSQANLDASRLQASKI
ISDAKEIGQLQGDKLVAEATDEAKRLKEKALTDIEQSKSDAISAVKTEMSDLTVLLAEKIMGANLDKTAQSQLIDSYLDD
LGEA

Sequences:

>Translated_164_residues
MSITFGELVGNFILVTGSVIVLLLLIKKFAWGAIESILQTRSQQISRDIDQAEQSRLSAQQLEAKSQANLDASRLQASKI
ISDAKEIGQLQGDKLVAEATDEAKRLKEKALTDIEQSKSDAISAVKTEMSDLTVLLAEKIMGANLDKTAQSQLIDSYLDD
LGEA
>Mature_163_residues
SITFGELVGNFILVTGSVIVLLLLIKKFAWGAIESILQTRSQQISRDIDQAEQSRLSAQQLEAKSQANLDASRLQASKII
SDAKEIGQLQGDKLVAEATDEAKRLKEKALTDIEQSKSDAISAVKTEMSDLTVLLAEKIMGANLDKTAQSQLIDSYLDDL
GEA

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_STRP1 (Q9A0J1)

Other databases:

- EMBL:   AE004092
- EMBL:   CP000017
- RefSeq:   NP_268978.1
- RefSeq:   YP_281940.1
- ProteinModelPortal:   Q9A0J1
- EnsemblBacteria:   EBSTRT00000000538
- EnsemblBacteria:   EBSTRT00000027842
- GeneID:   3572323
- GeneID:   900935
- GenomeReviews:   AE004092_GR
- GenomeReviews:   CP000017_GR
- KEGG:   spy:SPy_0756
- KEGG:   spz:M5005_Spy_0577
- GeneTree:   EBGT00050000027998
- HOGENOM:   HBG617328
- OMA:   QETRIVA
- ProtClustDB:   PRK05759
- BioCyc:   SPYO160490:SPY0756-MONOMER
- BioCyc:   SPYO293653:M5005_SPY0577-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17809; Mature: 17677

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc0ec048)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITFGELVGNFILVTGSVIVLLLLIKKFAWGAIESILQTRSQQISRDIDQAEQSRLSAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLEAKSQANLDASRLQASKIISDAKEIGQLQGDKLVAEATDEAKRLKEKALTDIEQSKSD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISAVKTEMSDLTVLLAEKIMGANLDKTAQSQLIDSYLDDLGEA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SITFGELVGNFILVTGSVIVLLLLIKKFAWGAIESILQTRSQQISRDIDQAEQSRLSAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLEAKSQANLDASRLQASKIISDAKEIGQLQGDKLVAEATDEAKRLKEKALTDIEQSKSD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AISAVKTEMSDLTVLLAEKIMGANLDKTAQSQLIDSYLDDLGEA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11296296