| Definition | Streptococcus pyogenes M1 GAS chromosome, complete genome. |
|---|---|
| Accession | NC_002737 |
| Length | 1,852,441 |
Click here to switch to the map view.
The map label for this gene is dinG [H]
Identifier: 15674717
GI number: 15674717
Start: 520872
End: 523373
Strand: Direct
Name: dinG [H]
Synonym: SPy_0649
Alternate gene names: 15674717
Gene position: 520872-523373 (Clockwise)
Preceding gene: 15674715
Following gene: 15674718
Centisome position: 28.12
GC content: 38.13
Gene sequence:
>2502_bases ATGTTTTGTTTTATAGATATAGCGTGCTATAATAGACTTACTATGACCCAGAAAAAACTTAGAAAATATGCAGTAGTTGA CTTGGAGGCTACTGGAGCAGGTCCCAATGCTTCTATTATTCAGGTTGGGATTGTTATTATCCAAGGAAATAAAATTATTG ATAGTTATGAAACAGATGTTAATCCTCATGAATCTTTGGATGAGCATATTGTTCATTTGACAGGTATTACGGATAAGCAG TTGGCTAAAGCTCCGGATTTTGGTCAAGTGGCGCATCACATTTATCAATTGATTGAAGATTGTATTTTTGTTGCCCACAA TGTAAAGTTCGATGCAAATTTATTGGCAGAAGCTCTTTTTTTAGAAGGATATGAGTTAACAATACCACGTGTTGATACTG TTGAATTAGCCCAACTATTTTTCCCTCGCTTTGAAAAGTATAACCTTAGTCACCTATCTAGGCAGCTCAATATTGATTTG GCAGAAGCTCATACTGCTATTGCAGATGCAAGAGCTACAGCTATACTGTTTTTAAGACTTTTACAAAAAATTGAGAGCCT TCCAATTGAGTGCTTAGAAAGCTTATTAGTCTATTCAGATAGCCTGCTATTTGAAACAGCAATGGTCATTCAAGAAGGAT TAGCCAAAGCCAAACCTTATGATCCCAACAAATACATTAAAATCAGACAGATTCTCTTACCAAAGGGCTCAAAAGCTCTC AAGCCTTATCAAATATCAAAAAGCTTCCCTATTAATATGGCACTATTAGGTCTGGAAGAAAGGCCTAAACAGACTCAATT TGCTCAGTTAATTGACGAAGATTACCATCAGGGAGTAGCTAGTTTTATTGAAGCTCAGACAGGTATTGGAAAAACCTACG GCTACCTGCTACCCCTTTTGGCAAAAGAAGATCAAAACCAAATCATTGTCAGTGTGCCCACCAAACTTCTTCAAGACCAA TTAATGGCTGGTGAAGTAGCTGCTATTCAAGAACAATTTCACATCGCCTGCCATAGTTTAAAAGGGCCCGCCAATTACCT AAAGCTAGATAGCTTTGCAGATAGTTTGGACCAAAATGACCAGAACCGTTTGGTGAATCGTTATAAAATGCAATTATTGG TTTGGCTCTTAGAAACTAAGACAGGAGACCTTGACGAAATCAAACAAAAGCAGCGCTTTGCAGCTTATTTTGAGCAGCTT AAGCACGATGGAGACATTAAGCAGTCTTCTGAATTTTACGATTACGATTTTTGGAGAGTTAGTTATGAAAAAGCCAAAAC AGCCCGTCTCCTGATTACCAACCATGCTTATTTTTTACACCGTGTTCAAGATGACAAGGACTTTGCTAGAAACAAGGTCT TGGTCTTTGATGAGGCCCAAAAGCTGATGCTCCAATTAGATCAATTATCACGTCATCAGCTTAACCTGACGGTTTTTTTA CAAACAATACAGGCCAAGTTAAGCAACCCTTTACCTCTTTTAGAAAAACGCTTATTGGAAAGCTTGTCGTTTGAACTGGG ACAAGTGTCAAGTGATTACTATCAAAATAAAGAGCACCAGCTTGCTCATGATTGGTCTCGTATAGCTGGCTACGCCAAAG AATTAACAGGAGCAGATTATCAAGAGTTACAAGCCTTTTTTGCTACCTCAGATGGTGACTACTGGCTTAGTAGCGAAAAG CAAGAGGAGAAGCGAGTGACTTATCTAAACAGTGCTAGTAAGGCATTTATTCATTTCCAACAGCTCTTACCAGAAACGGT GAAAACTTATTTTGTTTCTGCCACTTTAACCATCAGCTCAGAAGTAACCTTGGCAGACCTATTAGGTTTTGAAGAGTATC TCTATCATGTCATTGAAAAGGATAAAAAGCAAGACCAGTTGGTGCTTGTTGATCAAGAGGCGCCTATCGTGACAGAAGTC AGTGACCAAATCTATGTGGAAGCAATTGCAAAACGAATCGAAAGCTTGAAGCAAGAGGGTTATCCTATTTTAGTGCTTTT TAATTCTAAAAAACACTTGCTGTTGGTTTCAGACTATCTAGACCAATGGCAGGTGCCTCACTTAGCGCAGGAAAAGAATG GAACAGCTTATAATATTAAAAAACGGTTTGATCAAGGAGAGCAAACTATTTTGCTTGGTTTAGGTTCTTTTTGGGAAGGA GTTGATTTTATTCAAGCGGATCGTATGATTACCCTTATCGCACGATTGCCCTTTGATAACCCAGAGGATTTCTTTGTTAA GAAAATGAGTCATTATCTATTGGAAAAAGGTAAAAATCCTTTCAGAGATTACTTCTTGCCAATGACTATTTTGCGATTAA AACAGGCTATTGGTCGCACGATGCGTCGACAAGATCAAAAGTCAGTGGTTATTATTTTGGATCGTCGTCTCCTTACAAAG TCCTATGGACAAGTTATTTTGGAAGGTCTCGGTCAGGAATTTTTGATTTCTCAACAAAATTTTCACGATTGTCTAGTAGA AACGGACTGTTTTCTGATATAA
Upstream 100 bases:
>100_bases TAATACTGACACTGTGGGTTTCACTCACAGTGTTTTTTAAGAAGTATAAAAAATTATCCTATCTTGGTTATTGGAGTGAT GGCACCTTTGAGGTATAGTC
Downstream 100 bases:
>100_bases TGGAAAGGATCTATTATATCAGAAAAATTTTTAATGGCGTTAAGCACAATCAACTAACATTTAAATTAGTTTGAACTTTT ATTATGCTCTTTTAGACAAC
Product: bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 833; Mature: 833
Protein sequence:
>833_residues MFCFIDIACYNRLTMTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLTGITDKQ LAKAPDFGQVAHHIYQLIEDCIFVAHNVKFDANLLAEALFLEGYELTIPRVDTVELAQLFFPRFEKYNLSHLSRQLNIDL AEAHTAIADARATAILFLRLLQKIESLPIECLESLLVYSDSLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKAL KPYQISKSFPINMALLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLLAKEDQNQIIVSVPTKLLQDQ LMAGEVAAIQEQFHIACHSLKGPANYLKLDSFADSLDQNDQNRLVNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQL KHDGDIKQSSEFYDYDFWRVSYEKAKTARLLITNHAYFLHRVQDDKDFARNKVLVFDEAQKLMLQLDQLSRHQLNLTVFL QTIQAKLSNPLPLLEKRLLESLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATSDGDYWLSSEK QEEKRVTYLNSASKAFIHFQQLLPETVKTYFVSATLTISSEVTLADLLGFEEYLYHVIEKDKKQDQLVLVDQEAPIVTEV SDQIYVEAIAKRIESLKQEGYPILVLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGLGSFWEG VDFIQADRMITLIARLPFDNPEDFFVKKMSHYLLEKGKNPFRDYFLPMTILRLKQAIGRTMRRQDQKSVVIILDRRLLTK SYGQVILEGLGQEFLISQQNFHDCLVETDCFLI
Sequences:
>Translated_833_residues MFCFIDIACYNRLTMTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLTGITDKQ LAKAPDFGQVAHHIYQLIEDCIFVAHNVKFDANLLAEALFLEGYELTIPRVDTVELAQLFFPRFEKYNLSHLSRQLNIDL AEAHTAIADARATAILFLRLLQKIESLPIECLESLLVYSDSLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKAL KPYQISKSFPINMALLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLLAKEDQNQIIVSVPTKLLQDQ LMAGEVAAIQEQFHIACHSLKGPANYLKLDSFADSLDQNDQNRLVNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQL KHDGDIKQSSEFYDYDFWRVSYEKAKTARLLITNHAYFLHRVQDDKDFARNKVLVFDEAQKLMLQLDQLSRHQLNLTVFL QTIQAKLSNPLPLLEKRLLESLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATSDGDYWLSSEK QEEKRVTYLNSASKAFIHFQQLLPETVKTYFVSATLTISSEVTLADLLGFEEYLYHVIEKDKKQDQLVLVDQEAPIVTEV SDQIYVEAIAKRIESLKQEGYPILVLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGLGSFWEG VDFIQADRMITLIARLPFDNPEDFFVKKMSHYLLEKGKNPFRDYFLPMTILRLKQAIGRTMRRQDQKSVVIILDRRLLTK SYGQVILEGLGQEFLISQQNFHDCLVETDCFLI >Mature_833_residues MFCFIDIACYNRLTMTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLTGITDKQ LAKAPDFGQVAHHIYQLIEDCIFVAHNVKFDANLLAEALFLEGYELTIPRVDTVELAQLFFPRFEKYNLSHLSRQLNIDL AEAHTAIADARATAILFLRLLQKIESLPIECLESLLVYSDSLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKAL KPYQISKSFPINMALLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLLAKEDQNQIIVSVPTKLLQDQ LMAGEVAAIQEQFHIACHSLKGPANYLKLDSFADSLDQNDQNRLVNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQL KHDGDIKQSSEFYDYDFWRVSYEKAKTARLLITNHAYFLHRVQDDKDFARNKVLVFDEAQKLMLQLDQLSRHQLNLTVFL QTIQAKLSNPLPLLEKRLLESLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATSDGDYWLSSEK QEEKRVTYLNSASKAFIHFQQLLPETVKTYFVSATLTISSEVTLADLLGFEEYLYHVIEKDKKQDQLVLVDQEAPIVTEV SDQIYVEAIAKRIESLKQEGYPILVLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGLGSFWEG VDFIQADRMITLIARLPFDNPEDFFVKKMSHYLLEKGKNPFRDYFLPMTILRLKQAIGRTMRRQDQKSVVIILDRRLLTK SYGQVILEGLGQEFLISQQNFHDCLVETDCFLI
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788110, Length=629, Percent_Identity=24.0063593004769, Blast_Score=117, Evalue=4e-27, Organism=Escherichia coli, GI1787018, Length=172, Percent_Identity=33.7209302325581, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006054 - InterPro: IPR006310 - InterPro: IPR006055 - InterPro: IPR013520 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 - InterPro: IPR012337 [H]
Pfam domain/function: PF00929 Exonuc_X-T [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 95764; Mature: 95764
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCFIDIACYNRLTMTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDV CEEEEEEHHHCHHHHHHHHHHHEEEEEEEECCCCCCCCEEEEEEEEEECCEEEECCCCCC NPHESLDEHIVHLTGITDKQLAKAPDFGQVAHHIYQLIEDCIFVAHNVKFDANLLAEALF CCHHHHHHHEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LEGYELTIPRVDTVELAQLFFPRFEKYNLSHLSRQLNIDLAEAHTAIADARATAILFLRL HCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LQKIESLPIECLESLLVYSDSLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKAL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCC KPYQISKSFPINMALLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLL CCEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AKEDQNQIIVSVPTKLLQDQLMAGEVAAIQEQFHIACHSLKGPANYLKLDSFADSLDQND CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC QNRLVNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQLKHDGDIKQSSEFYDYDFWRV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE SYEKAKTARLLITNHAYFLHRVQDDKDFARNKVLVFDEAQKLMLQLDQLSRHQLNLTVFL EHHHCCCEEEEEECCCEEEEEECCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH QTIQAKLSNPLPLLEKRLLESLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADY HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCH QELQAFFATSDGDYWLSSEKQEEKRVTYLNSASKAFIHFQQLLPETVKTYFVSATLTISS HHHHHHHCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEEECC EVTLADLLGFEEYLYHVIEKDKKQDQLVLVDQEAPIVTEVSDQIYVEAIAKRIESLKQEG CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCC YPILVLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGLGSFWEG CEEEEEECCCCCEEEEEHHHHCCCCCCHHHCCCCCEEEHHHHCCCCCCEEEEECCHHHCC VDFIQADRMITLIARLPFDNPEDFFVKKMSHYLLEKGKNPFRDYFLPMTILRLKQAIGRT CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MRRQDQKSVVIILDRRLLTKSYGQVILEGLGQEFLISQQNFHDCLVETDCFLI HHHCCCCCEEEEECHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MFCFIDIACYNRLTMTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDV CEEEEEEHHHCHHHHHHHHHHHEEEEEEEECCCCCCCCEEEEEEEEEECCEEEECCCCCC NPHESLDEHIVHLTGITDKQLAKAPDFGQVAHHIYQLIEDCIFVAHNVKFDANLLAEALF CCHHHHHHHEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LEGYELTIPRVDTVELAQLFFPRFEKYNLSHLSRQLNIDLAEAHTAIADARATAILFLRL HCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LQKIESLPIECLESLLVYSDSLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKAL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCC KPYQISKSFPINMALLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLL CCEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AKEDQNQIIVSVPTKLLQDQLMAGEVAAIQEQFHIACHSLKGPANYLKLDSFADSLDQND CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC QNRLVNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQLKHDGDIKQSSEFYDYDFWRV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE SYEKAKTARLLITNHAYFLHRVQDDKDFARNKVLVFDEAQKLMLQLDQLSRHQLNLTVFL EHHHCCCEEEEEECCCEEEEEECCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH QTIQAKLSNPLPLLEKRLLESLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADY HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCH QELQAFFATSDGDYWLSSEKQEEKRVTYLNSASKAFIHFQQLLPETVKTYFVSATLTISS HHHHHHHCCCCCCEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEEECC EVTLADLLGFEEYLYHVIEKDKKQDQLVLVDQEAPIVTEVSDQIYVEAIAKRIESLKQEG CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCC YPILVLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGLGSFWEG CEEEEEECCCCCEEEEEHHHHCCCCCCHHHCCCCCEEEHHHHCCCCCCEEEEECCHHHCC VDFIQADRMITLIARLPFDNPEDFFVKKMSHYLLEKGKNPFRDYFLPMTILRLKQAIGRT CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH MRRQDQKSVVIILDRRLLTKSYGQVILEGLGQEFLISQQNFHDCLVETDCFLI HHHCCCCCEEEEECHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA