| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474455
Identifier: 13474455
GI number: 13474455
Start: 4267468
End: 4268322
Strand: Reverse
Name: 13474455
Synonym: mll5341
Alternate gene names: NA
Gene position: 4268322-4267468 (Counterclockwise)
Preceding gene: 13474456
Following gene: 13474454
Centisome position: 60.66
GC content: 60.7
Gene sequence:
>855_bases ATGCCAACGAACCTTTTCCGCTTCATCCTCGCCGTGATGTTGCTGCCGTTCTTGTGGACCGCCGCTGGCGCGCAAGCCGT CAGCTTTCCGGACCTGGGCAGCCCGCTGCCCGGCCGCAACGATGTCACCTATCTCGACCTGGCCAAATTGGTCATCCCTA GCCTCGCCGCGAACGGGGACGGTTTCTACAAGGGCGGATTGCCGATCGAGATGCGCCACATCGAGGGACCGGATGGCGGC GGTTCGCCGCCGGAGACATCCAGCTTCCCCAATGCGGCCGTGCTTCCTATCAAGGCCGGCGGCAAGGACCGGCTGGCGAT GCTGTTCGACCTCGGCGATTCTCCCGACAGCGCCGAGGGTTATGCGGTGCTGGCGCTCTACGACGTCACGGCCAAGCCGA AACTGCTCGATGCGGTCAATGTCGCGGTCGACCGCAGCACCTATTTCCGCGAACCGAACAAGCTTTCGATCGACGCCGGC GACGACATGCTCATCACCATGAGCACGCATTTCAATTCGAGCCAGGGCTATGTGATCACGCCGCTGATCATGGTCCGCGA CGACAAATTCGAGCTGATCGACATGATCTACACGTTCGACGAAAGGCTCTGCGCCTATAGCCGCAAGCAGGATATGGCCT TCCAGACCATCGCCGCCGGCCAGCTCTATGCCGCCGTCAAGGTGACGGTGACCGACAGCACCGTGCCAAGCGATGAAAAC TGCGACGACGCGCCGCCCGAAGCGTCGTCGCACGATATTTCCGTCACCTATCATTGGGACAAGAAGACATCGCGCTACGT CAAGGATTCCGACGCATTCGAGAAATTGGCAGCAGAGAACGAGAAACGCTTCTGA
Upstream 100 bases:
>100_bases AACTGGCCGGACTGGTGCCGATCCACTGATCCGGTTCCAGCACGGCTGCGCGATGCTGGAACCCGTGCTAGCGTGAGTGG CCTGATCTTGGGGGGCGCCC
Downstream 100 bases:
>100_bases ACCAAGCGCATTCATTTGCCCGGCCGAAGGCGGCGCGATAGCATCCGTCCCGACACTCGTGATGGGGAGCATTCATGGAC AAGGGCAAGATCTTTCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MPTNLFRFILAVMLLPFLWTAAGAQAVSFPDLGSPLPGRNDVTYLDLAKLVIPSLAANGDGFYKGGLPIEMRHIEGPDGG GSPPETSSFPNAAVLPIKAGGKDRLAMLFDLGDSPDSAEGYAVLALYDVTAKPKLLDAVNVAVDRSTYFREPNKLSIDAG DDMLITMSTHFNSSQGYVITPLIMVRDDKFELIDMIYTFDERLCAYSRKQDMAFQTIAAGQLYAAVKVTVTDSTVPSDEN CDDAPPEASSHDISVTYHWDKKTSRYVKDSDAFEKLAAENEKRF
Sequences:
>Translated_284_residues MPTNLFRFILAVMLLPFLWTAAGAQAVSFPDLGSPLPGRNDVTYLDLAKLVIPSLAANGDGFYKGGLPIEMRHIEGPDGG GSPPETSSFPNAAVLPIKAGGKDRLAMLFDLGDSPDSAEGYAVLALYDVTAKPKLLDAVNVAVDRSTYFREPNKLSIDAG DDMLITMSTHFNSSQGYVITPLIMVRDDKFELIDMIYTFDERLCAYSRKQDMAFQTIAAGQLYAAVKVTVTDSTVPSDEN CDDAPPEASSHDISVTYHWDKKTSRYVKDSDAFEKLAAENEKRF >Mature_283_residues PTNLFRFILAVMLLPFLWTAAGAQAVSFPDLGSPLPGRNDVTYLDLAKLVIPSLAANGDGFYKGGLPIEMRHIEGPDGGG SPPETSSFPNAAVLPIKAGGKDRLAMLFDLGDSPDSAEGYAVLALYDVTAKPKLLDAVNVAVDRSTYFREPNKLSIDAGD DMLITMSTHFNSSQGYVITPLIMVRDDKFELIDMIYTFDERLCAYSRKQDMAFQTIAAGQLYAAVKVTVTDSTVPSDENC DDAPPEASSHDISVTYHWDKKTSRYVKDSDAFEKLAAENEKRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31023; Mature: 30892
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNLFRFILAVMLLPFLWTAAGAQAVSFPDLGSPLPGRNDVTYLDLAKLVIPSLAANGD CCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC GFYKGGLPIEMRHIEGPDGGGSPPETSSFPNAAVLPIKAGGKDRLAMLFDLGDSPDSAEG CEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCC YAVLALYDVTAKPKLLDAVNVAVDRSTYFREPNKLSIDAGDDMLITMSTHFNSSQGYVIT EEEEEEEECCCCCHHHHHHHHEECCHHHHCCCCEEEEECCCCEEEEEEECCCCCCCEEEE PLIMVRDDKFELIDMIYTFDERLCAYSRKQDMAFQTIAAGQLYAAVKVTVTDSTVPSDEN EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEEEEEECCCCCCCCC CDDAPPEASSHDISVTYHWDKKTSRYVKDSDAFEKLAAENEKRF CCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure PTNLFRFILAVMLLPFLWTAAGAQAVSFPDLGSPLPGRNDVTYLDLAKLVIPSLAANGD CHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC GFYKGGLPIEMRHIEGPDGGGSPPETSSFPNAAVLPIKAGGKDRLAMLFDLGDSPDSAEG CEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCC YAVLALYDVTAKPKLLDAVNVAVDRSTYFREPNKLSIDAGDDMLITMSTHFNSSQGYVIT EEEEEEEECCCCCHHHHHHHHEECCHHHHCCCCEEEEECCCCEEEEEEECCCCCCCEEEE PLIMVRDDKFELIDMIYTFDERLCAYSRKQDMAFQTIAAGQLYAAVKVTVTDSTVPSDEN EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEEEEEECCCCCCCCC CDDAPPEASSHDISVTYHWDKKTSRYVKDSDAFEKLAAENEKRF CCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA