| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yieH [H]
Identifier: 13474456
GI number: 13474456
Start: 4268394
End: 4269053
Strand: Reverse
Name: yieH [H]
Synonym: mll5344
Alternate gene names: 13474456
Gene position: 4269053-4268394 (Counterclockwise)
Preceding gene: 13474457
Following gene: 13474455
Centisome position: 60.67
GC content: 62.27
Gene sequence:
>660_bases ATGCAAATACCCAAGCTTGTGATCTTCGACTGCGACGGGATTCTCGTCGACACGGAGAATCTCGCCAATCGACGCCTCGC TGAATGGTTGACGGCTGCCGGCTATCCGACAAGCTTCGAATATTGCCGCAAGAATTTCTCCGGCCGCAGCATGGCCTCGG TCCAGAAAGAGATCGAGGAGACGACCGAGGTCCGGCTCGGCGCCGATTTCGTCGAGCGTTGGAATGCCGGCCTGCCGGAC CTGTTTTCCCATGGCGTCGAGGCAATCCCTTACGTCCGCGAGTTCGTCGAAGCGGTGCGCGCGGCCGGCATTGCCTATTG CGTCGCCACGTCGGCCAGGATTTCGAAGATGCACATCACGCTTGGCCAGACCGGACTGTTGCCGCTGTTCGAACATGCGA TGTTTTCGTCGACCATGGTCGGGCGCGGCAAGCCGTTCCCTGACCTGTTCCTGCATGCGGCCAAGACCATGGGCTTCGCG CCGGCCGATTGCATCGTCATCGAGGACAGCGTCGCCGGCACGCAGGCCGGGATCACCGCCGGCATGCGGGTGTTCTCCTA TCATGGCGATCCCCATTCCGACCGCGATGGCCTGATCGAGGCCGGCGGCATCCTGTTCGACGACATGCGCGAACTGGCCG GACTGGTGCCGATCCACTGA
Upstream 100 bases:
>100_bases TCGTTTTCGCTGTTGTGACGCAGGCGGCCGTCGAGGAGCGTTCGCTGGCCGGCGGCACGGCACGCGGTTCGGGCGGGTTC GGATCGACCGGCACCGTCTG
Downstream 100 bases:
>100_bases TCCGGTTCCAGCACGGCTGCGCGATGCTGGAACCCGTGCTAGCGTGAGTGGCCTGATCTTGGGGGGCGCCCATGCCAACG AACCTTTTCCGCTTCATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MQIPKLVIFDCDGILVDTENLANRRLAEWLTAAGYPTSFEYCRKNFSGRSMASVQKEIEETTEVRLGADFVERWNAGLPD LFSHGVEAIPYVREFVEAVRAAGIAYCVATSARISKMHITLGQTGLLPLFEHAMFSSTMVGRGKPFPDLFLHAAKTMGFA PADCIVIEDSVAGTQAGITAGMRVFSYHGDPHSDRDGLIEAGGILFDDMRELAGLVPIH
Sequences:
>Translated_219_residues MQIPKLVIFDCDGILVDTENLANRRLAEWLTAAGYPTSFEYCRKNFSGRSMASVQKEIEETTEVRLGADFVERWNAGLPD LFSHGVEAIPYVREFVEAVRAAGIAYCVATSARISKMHITLGQTGLLPLFEHAMFSSTMVGRGKPFPDLFLHAAKTMGFA PADCIVIEDSVAGTQAGITAGMRVFSYHGDPHSDRDGLIEAGGILFDDMRELAGLVPIH >Mature_219_residues MQIPKLVIFDCDGILVDTENLANRRLAEWLTAAGYPTSFEYCRKNFSGRSMASVQKEIEETTEVRLGADFVERWNAGLPD LFSHGVEAIPYVREFVEAVRAAGIAYCVATSARISKMHITLGQTGLLPLFEHAMFSSTMVGRGKPFPDLFLHAAKTMGFA PADCIVIEDSVAGTQAGITAGMRVFSYHGDPHSDRDGLIEAGGILFDDMRELAGLVPIH
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=188, Percent_Identity=34.0425531914894, Blast_Score=102, Evalue=2e-23, Organism=Drosophila melanogaster, GI116008157, Length=203, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI17137324, Length=203, Percent_Identity=28.0788177339901, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI20129151, Length=187, Percent_Identity=28.8770053475936, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23928; Mature: 23928
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIPKLVIFDCDGILVDTENLANRRLAEWLTAAGYPTSFEYCRKNFSGRSMASVQKEIEE CCCCCEEEEECCCEEEECHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHH TTEVRLGADFVERWNAGLPDLFSHGVEAIPYVREFVEAVRAAGIAYCVATSARISKMHIT HHHHHHCHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE LGQTGLLPLFEHAMFSSTMVGRGKPFPDLFLHAAKTMGFAPADCIVIEDSVAGTQAGITA ECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHH GMRVFSYHGDPHSDRDGLIEAGGILFDDMRELAGLVPIH HHHEEEECCCCCCCCCCEECCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MQIPKLVIFDCDGILVDTENLANRRLAEWLTAAGYPTSFEYCRKNFSGRSMASVQKEIEE CCCCCEEEEECCCEEEECHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHH TTEVRLGADFVERWNAGLPDLFSHGVEAIPYVREFVEAVRAAGIAYCVATSARISKMHIT HHHHHHCHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE LGQTGLLPLFEHAMFSSTMVGRGKPFPDLFLHAAKTMGFAPADCIVIEDSVAGTQAGITA ECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHH GMRVFSYHGDPHSDRDGLIEAGGILFDDMRELAGLVPIH HHHEEEECCCCCCCCCCEECCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]