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The map label for this gene is yliB [C]

Identifier: 13474274

GI number: 13474274

Start: 4063113

End: 4064699

Strand: Reverse

Name: yliB [C]

Synonym: mll5127

Alternate gene names: 13474274

Gene position: 4064699-4063113 (Counterclockwise)

Preceding gene: 13474275

Following gene: 13474273

Centisome position: 57.77

GC content: 63.77

Gene sequence:

>1587_bases
ATGTCGAACGAACTGGAATTCCTTAGCCGACGCGTTGCTGCGGGCAAGCTGAGCCGTCGTGATTTTCTCGGCCGGGCGGC
AGCGCTCGGCATCGCCGCGCCCTTCGCCAACTCGCTGCTTTCAAGTGCTGCGCGCGCGGCCGGCCCGGTCAAGGGCGGCA
CGCTGAAGGCCGGCCTGGTCGGGGGTGAATCCACCAACAGCCTCGATCCGGCGCTGATGATGACGCAGGTGCCGTTCGCC
TTCGGCAAGTGCTGGGGCGAAATGATCGTCGAGCTGTCGCCGGACGGCAAGCTCGAGAACCGCATCGCCGAAGAGATCGG
CTCGTCCGACGACGCGAAGACCTGGACCCTGAAGATCCGCGACGGGGTGGAATTCCACAACGGCAAGACCGTGACCGCCG
AGGACGTGGCCGCCACGCTGGAGCGCCACTCGGACGAGAAGTCGAAATCCGGCGCGCTCGGCTACATGAAGGGCATCGCC
ACCATCAAGGCCAGCGGCAAGGAAGTGGTGCTGACGCTGAAGGAGGCCAATGCCGACCTTCCCTATCTGCTCAGCGACTA
CCACCTGATCGTCCAGCCGAATGGCGGCAAGGACAAGCCCGATGCCGGCATTTCGGCCGGTCCGTATGTGGTCAAGACCA
ACGAGCCCGGCGTGCGCCATGGCGGGGAGCGCTTCGCCAATTACTGGCAGGGCGACAAGATGGGCCATGCCGACCAGATC
GAAGTCATCGTCATCAATGACGCGACGGCGCGCACGGCGGCCCTGCAGGGCGGCCAGGTCAACATGATCAACCGCGTCGA
GCCGAAGATCGTCGACCTGATCAAGCGCGTGCCGGGCGTGACCATCCGCAACCATGCGGGTCCGGGCCACTATGTCTTCA
TCATGCATTGCAACACGGCGCCGTTCGACAACAACGACCTCAGGATGGCGCTGAAGCTCGCCATCGACCGCGAGGAAATG
CTGAACAAGGTGCTGCGCGGCTACGGCTCGCTAGGCAACGACTTCCCGATCAACTCGTCCTATCCGCTCTTCACCGAGAT
CGAGCAGCGCAAATACGATCCCGACAAGGCCAAGTTCCACTACAAGAAATCAGGCCATGACGGCACCGTGCTGCTCAGGA
CCTCCGACGTCGCCTTCCCGGGCGCGGTGGATGCTTCGCAGCTCTTCCAGCAGAGCGCGGCCAAGGCCGGCATCAAGATC
GAGCTCAAGCGCGAGCCCGGCGACGGCTACTGGAACGAGGTCTGGAACAAGCAGCCCTTCTGCGCTTCCTATTGGGGCGG
ACGTTCGACGCAGGACCAGATGTACTCGACCGCCTATCTGTCGACCGCCGACTGGAACGACACGCGTTTCAAGCGGCCGG
ACTTCGACAAGATGGTGCTGGCGGCGCGCGCCGAACTCGACGAGGCCAAGCGCAAGCAGATGTACCACGACATGGCCGTC
ATGGTGCGCGACGAAGGCGGCCTGATCCTGCCGATGTTCAACCAGTTCATCGACGCCACCGGCGCCAAGGTCGATGGCTG
GGTGGACGATCCGCACCAGGAACTGATGAACGGCTACGCCCTGGCAAAGTGCTGGCTGCAGGCCTGA

Upstream 100 bases:

>100_bases
ATTCGGTCTTGCTTACCGGTTTCCCTTACGGTCATTATTGCCCTCACAAGAAGCAAGAAAGTCGACCGCAGAGTCGAACC
AACAGAGTGAGGAACTTAAA

Downstream 100 bases:

>100_bases
GTCCGGCTTTGCGGAGATGTCCTCACCCATCCTGAAGCTAATTGCCCAGCGCATCGCGCTGGGCATCCTCCTTTTGCTGG
CCATTTCGGTCCTGATCTTC

Product: ABC transporter, binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MSNELEFLSRRVAAGKLSRRDFLGRAAALGIAAPFANSLLSSAARAAGPVKGGTLKAGLVGGESTNSLDPALMMTQVPFA
FGKCWGEMIVELSPDGKLENRIAEEIGSSDDAKTWTLKIRDGVEFHNGKTVTAEDVAATLERHSDEKSKSGALGYMKGIA
TIKASGKEVVLTLKEANADLPYLLSDYHLIVQPNGGKDKPDAGISAGPYVVKTNEPGVRHGGERFANYWQGDKMGHADQI
EVIVINDATARTAALQGGQVNMINRVEPKIVDLIKRVPGVTIRNHAGPGHYVFIMHCNTAPFDNNDLRMALKLAIDREEM
LNKVLRGYGSLGNDFPINSSYPLFTEIEQRKYDPDKAKFHYKKSGHDGTVLLRTSDVAFPGAVDASQLFQQSAAKAGIKI
ELKREPGDGYWNEVWNKQPFCASYWGGRSTQDQMYSTAYLSTADWNDTRFKRPDFDKMVLAARAELDEAKRKQMYHDMAV
MVRDEGGLILPMFNQFIDATGAKVDGWVDDPHQELMNGYALAKCWLQA

Sequences:

>Translated_528_residues
MSNELEFLSRRVAAGKLSRRDFLGRAAALGIAAPFANSLLSSAARAAGPVKGGTLKAGLVGGESTNSLDPALMMTQVPFA
FGKCWGEMIVELSPDGKLENRIAEEIGSSDDAKTWTLKIRDGVEFHNGKTVTAEDVAATLERHSDEKSKSGALGYMKGIA
TIKASGKEVVLTLKEANADLPYLLSDYHLIVQPNGGKDKPDAGISAGPYVVKTNEPGVRHGGERFANYWQGDKMGHADQI
EVIVINDATARTAALQGGQVNMINRVEPKIVDLIKRVPGVTIRNHAGPGHYVFIMHCNTAPFDNNDLRMALKLAIDREEM
LNKVLRGYGSLGNDFPINSSYPLFTEIEQRKYDPDKAKFHYKKSGHDGTVLLRTSDVAFPGAVDASQLFQQSAAKAGIKI
ELKREPGDGYWNEVWNKQPFCASYWGGRSTQDQMYSTAYLSTADWNDTRFKRPDFDKMVLAARAELDEAKRKQMYHDMAV
MVRDEGGLILPMFNQFIDATGAKVDGWVDDPHQELMNGYALAKCWLQA
>Mature_527_residues
SNELEFLSRRVAAGKLSRRDFLGRAAALGIAAPFANSLLSSAARAAGPVKGGTLKAGLVGGESTNSLDPALMMTQVPFAF
GKCWGEMIVELSPDGKLENRIAEEIGSSDDAKTWTLKIRDGVEFHNGKTVTAEDVAATLERHSDEKSKSGALGYMKGIAT
IKASGKEVVLTLKEANADLPYLLSDYHLIVQPNGGKDKPDAGISAGPYVVKTNEPGVRHGGERFANYWQGDKMGHADQIE
VIVINDATARTAALQGGQVNMINRVEPKIVDLIKRVPGVTIRNHAGPGHYVFIMHCNTAPFDNNDLRMALKLAIDREEML
NKVLRGYGSLGNDFPINSSYPLFTEIEQRKYDPDKAKFHYKKSGHDGTVLLRTSDVAFPGAVDASQLFQQSAAKAGIKIE
LKREPGDGYWNEVWNKQPFCASYWGGRSTQDQMYSTAYLSTADWNDTRFKRPDFDKMVLAARAELDEAKRKQMYHDMAVM
VRDEGGLILPMFNQFIDATGAKVDGWVDDPHQELMNGYALAKCWLQA

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=382, Percent_Identity=26.7015706806283, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1789966, Length=455, Percent_Identity=21.978021978022, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789887, Length=465, Percent_Identity=23.4408602150538, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787495, Length=527, Percent_Identity=23.3396584440228, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787762, Length=503, Percent_Identity=21.4711729622266, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57982; Mature: 57851

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNELEFLSRRVAAGKLSRRDFLGRAAALGIAAPFANSLLSSAARAAGPVKGGTLKAGLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
GGESTNSLDPALMMTQVPFAFGKCWGEMIVELSPDGKLENRIAEEIGSSDDAKTWTLKIR
CCCCCCCCCHHHHHHHCHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEE
DGVEFHNGKTVTAEDVAATLERHSDEKSKSGALGYMKGIATIKASGKEVVLTLKEANADL
CCCEECCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEECCCCEEEEEEECCCCCC
PYLLSDYHLIVQPNGGKDKPDAGISAGPYVVKTNEPGVRHGGERFANYWQGDKMGHADQI
CEEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCE
EVIVINDATARTAALQGGQVNMINRVEPKIVDLIKRVPGVTIRNHAGPGHYVFIMHCNTA
EEEEEECCCCHHHHCCCCCEEECCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCC
PFDNNDLRMALKLAIDREEMLNKVLRGYGSLGNDFPINSSYPLFTEIEQRKYDPDKAKFH
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHEEE
YKKSGHDGTVLLRTSDVAFPGAVDASQLFQQSAAKAGIKIELKREPGDGYWNEVWNKQPF
EEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCCC
CASYWGGRSTQDQMYSTAYLSTADWNDTRFKRPDFDKMVLAARAELDEAKRKQMYHDMAV
CHHCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEE
MVRDEGGLILPMFNQFIDATGAKVDGWVDDPHQELMNGYALAKCWLQA
EEECCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNELEFLSRRVAAGKLSRRDFLGRAAALGIAAPFANSLLSSAARAAGPVKGGTLKAGLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
GGESTNSLDPALMMTQVPFAFGKCWGEMIVELSPDGKLENRIAEEIGSSDDAKTWTLKIR
CCCCCCCCCHHHHHHHCHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEE
DGVEFHNGKTVTAEDVAATLERHSDEKSKSGALGYMKGIATIKASGKEVVLTLKEANADL
CCCEECCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEECCCCEEEEEEECCCCCC
PYLLSDYHLIVQPNGGKDKPDAGISAGPYVVKTNEPGVRHGGERFANYWQGDKMGHADQI
CEEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCE
EVIVINDATARTAALQGGQVNMINRVEPKIVDLIKRVPGVTIRNHAGPGHYVFIMHCNTA
EEEEEECCCCHHHHCCCCCEEECCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCC
PFDNNDLRMALKLAIDREEMLNKVLRGYGSLGNDFPINSSYPLFTEIEQRKYDPDKAKFH
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHEEE
YKKSGHDGTVLLRTSDVAFPGAVDASQLFQQSAAKAGIKIELKREPGDGYWNEVWNKQPF
EEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCCC
CASYWGGRSTQDQMYSTAYLSTADWNDTRFKRPDFDKMVLAARAELDEAKRKQMYHDMAV
CHHCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEE
MVRDEGGLILPMFNQFIDATGAKVDGWVDDPHQELMNGYALAKCWLQA
EEECCCCEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA