| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473864
Identifier: 13473864
GI number: 13473864
Start: 3651949
End: 3652932
Strand: Direct
Name: 13473864
Synonym: mlr4601
Alternate gene names: NA
Gene position: 3651949-3652932 (Clockwise)
Preceding gene: 13473861
Following gene: 13473867
Centisome position: 51.9
GC content: 64.53
Gene sequence:
>984_bases ATGCTTTCCCGTGTTTTCGGCTTTGGCCGCCGCCCCTTCGAATCGCTCTCCGAACAAGAAATCCTGGCGCTGGCCATTTC ATCCGAGGAAGATGACGGGCGCATCTACCGGGCCTATGCCGACGGGCTGGCGGAAAGTTTTCCGCAATCGGCGAAAGTGT TCGAGGAGATGGCCGAGGAAGAGGACGGCCATCGCGACTCGCTGATCGAGCTCTTCCGCAAGCGTTTCGGCGAGCGCATC CCGCTGATCCGGCGCGAACATGTGAGGGGCTATTATGAGCGCAAGCCCGACTGGCTGGTGAGGCCGCTCGGCATCGAGCA TGTGCGCCGCCAGGCCGAGGCGATGGAGCAACAGGCCTACCGTTTCTATGTCGAAGCGGCCAAGCGAACATCAGATGCCT CGACCCGGAAACTGCTCGACGACCTGGCGGCGGCCGAGCAGGGGCACGAGAACTCGGCGCAGCGGCTGGAGCAGAAGCAT GTGCCTGGCGATGTGAAGGATGAAGAGGCCAGCGCCGAACAGCGCCAGTTCATCCTCACCTATGTGCAGCCGGGCCTGGC CGGGCTGATGGATGGATCGGTGTCGACGCTGGCACCGATCTTCGCCGCCGCCTTTGCCACCCATGACACCTGGCAGACGC TGCTGGTCGGCCTTGCCGCCTCGATCGGCGCCGGCATTTCGATGGGCTTCACCGAGGTCGCGTCCGACGACGGCAAATTG TCGGGCCGCGGCTCGCCGATAAAGCGCGGCCTCACCGTCGGTATCATGACGACGCTGGGCGGTCTCGGCCACGCGCTGCC CTATCTCATCCCGCATTTCTGGACGGCGACGGCCGTTGCCGCCGTCGTGGTGTTCTTCGAACTGTGGGCCATCGCCTTCG TCCAGAACCGCTACATGCAGACCCCGTTCCTGCGCGCCGCCTTCCAGGTGGTGCTGGGCGGCGCGCTGGTGTTCGCCGCA GGTGTGTTGATCGGGAATGCTTAG
Upstream 100 bases:
>100_bases CAAGCGCTTCAACAATTCTTGAACCCGCGGCCTCAGCGCGATTGACCCCGAGCACGCTAAACCCTAGTTTAGAACAATTC TAAACTAGGGTCCTTTCCTC
Downstream 100 bases:
>100_bases CTTCTTTCCTTCTCCCACAAGGGGAGAAGGAAAGAAGCGCTACCCATTCACCGCCCGGCTGTCCGCCGGCGCCTCGTCCC GTTCCATCAGCCCATAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: Rubrerythrin Subfamily; Transmembrane Protein; Ferritin-Like Protein
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MLSRVFGFGRRPFESLSEQEILALAISSEEDDGRIYRAYADGLAESFPQSAKVFEEMAEEEDGHRDSLIELFRKRFGERI PLIRREHVRGYYERKPDWLVRPLGIEHVRRQAEAMEQQAYRFYVEAAKRTSDASTRKLLDDLAAAEQGHENSAQRLEQKH VPGDVKDEEASAEQRQFILTYVQPGLAGLMDGSVSTLAPIFAAAFATHDTWQTLLVGLAASIGAGISMGFTEVASDDGKL SGRGSPIKRGLTVGIMTTLGGLGHALPYLIPHFWTATAVAAVVVFFELWAIAFVQNRYMQTPFLRAAFQVVLGGALVFAA GVLIGNA
Sequences:
>Translated_327_residues MLSRVFGFGRRPFESLSEQEILALAISSEEDDGRIYRAYADGLAESFPQSAKVFEEMAEEEDGHRDSLIELFRKRFGERI PLIRREHVRGYYERKPDWLVRPLGIEHVRRQAEAMEQQAYRFYVEAAKRTSDASTRKLLDDLAAAEQGHENSAQRLEQKH VPGDVKDEEASAEQRQFILTYVQPGLAGLMDGSVSTLAPIFAAAFATHDTWQTLLVGLAASIGAGISMGFTEVASDDGKL SGRGSPIKRGLTVGIMTTLGGLGHALPYLIPHFWTATAVAAVVVFFELWAIAFVQNRYMQTPFLRAAFQVVLGGALVFAA GVLIGNA >Mature_327_residues MLSRVFGFGRRPFESLSEQEILALAISSEEDDGRIYRAYADGLAESFPQSAKVFEEMAEEEDGHRDSLIELFRKRFGERI PLIRREHVRGYYERKPDWLVRPLGIEHVRRQAEAMEQQAYRFYVEAAKRTSDASTRKLLDDLAAAEQGHENSAQRLEQKH VPGDVKDEEASAEQRQFILTYVQPGLAGLMDGSVSTLAPIFAAAFATHDTWQTLLVGLAASIGAGISMGFTEVASDDGKL SGRGSPIKRGLTVGIMTTLGGLGHALPYLIPHFWTATAVAAVVVFFELWAIAFVQNRYMQTPFLRAAFQVVLGGALVFAA GVLIGNA
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36066; Mature: 36066
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRVFGFGRRPFESLSEQEILALAISSEEDDGRIYRAYADGLAESFPQSAKVFEEMAEE CCCCHHCCCCCCHHHHCHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH EDGHRDSLIELFRKRFGERIPLIRREHVRGYYERKPDWLVRPLGIEHVRRQAEAMEQQAY CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHH RFYVEAAKRTSDASTRKLLDDLAAAEQGHENSAQRLEQKHVPGDVKDEEASAEQRQFILT HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH YVQPGLAGLMDGSVSTLAPIFAAAFATHDTWQTLLVGLAASIGAGISMGFTEVASDDGKL HHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC SGRGSPIKRGLTVGIMTTLGGLGHALPYLIPHFWTATAVAAVVVFFELWAIAFVQNRYMQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPFLRAAFQVVLGGALVFAAGVLIGNA CHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSRVFGFGRRPFESLSEQEILALAISSEEDDGRIYRAYADGLAESFPQSAKVFEEMAEE CCCCHHCCCCCCHHHHCHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH EDGHRDSLIELFRKRFGERIPLIRREHVRGYYERKPDWLVRPLGIEHVRRQAEAMEQQAY CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHH RFYVEAAKRTSDASTRKLLDDLAAAEQGHENSAQRLEQKHVPGDVKDEEASAEQRQFILT HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH YVQPGLAGLMDGSVSTLAPIFAAAFATHDTWQTLLVGLAASIGAGISMGFTEVASDDGKL HHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC SGRGSPIKRGLTVGIMTTLGGLGHALPYLIPHFWTATAVAAVVVFFELWAIAFVQNRYMQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPFLRAAFQVVLGGALVFAAGVLIGNA CHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA