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The map label for this gene is ybhS [H]

Identifier: 13473861

GI number: 13473861

Start: 3648937

End: 3650073

Strand: Direct

Name: ybhS [H]

Synonym: mlr4596

Alternate gene names: 13473861

Gene position: 3648937-3650073 (Clockwise)

Preceding gene: 13473860

Following gene: 13473864

Centisome position: 51.86

GC content: 64.64

Gene sequence:

>1137_bases
ATGAACAGCGTCTTCTCCTTCGCCCGGCTCGGCGCGCTGCTGATCAAGGAATTCATCCAGATGCGGCGCGACCGCATCAC
CTTCGCCATGATGCTCGGCGTGCCGCTGCTGCAGCTCATTCTGTTCGGCTTCGCCATCAACAACGATCCCAAGGGCTTGC
CGACGGCGCTGGTGGCGATGAGCAACGACCAGTACACGCGCGCCATGGTCTCGGCGCTGCAGGTGACGGGCTACTATCAT
TTCGACCATGTCACCGAGAGCGCCGAAGAGGCGGAGTTCCTGATGGCGCGCGGCGACGTTTCCTTCGTCGTCACCATCCC
GGCCGACTTCGCCAGCCGAGTCGAGCGCGGCGACAATCCGCAGATCCTGATCGAGGCCGACGCGACCGATCCCTCGGCCG
CGAGCGGCGCCATTTCCACGCTGAGCACGGTGGCGAGCCAGGCGCTGCTGCGCGCCCAAGGCATGCAGGCGGCCGCCGCC
GAGAATGCCAGGCAGCAGCTGCAGGTGGTGGTGCACCATCGCTACAATCCTGAAGGCATTTCGCAATACAACATCGTGCC
CGGCCTGCTCGGCGTCATCCTGCAGATGACCATGGTGATGATGACGGCCATGGCGCTGACCCGCGAAACCGAGCGCGGCA
CGATGGAAAACCTGCTCGCCATGCCGTCCAGTCCGGCCGAGATCATGCTGGGCAAGGTGCTGCCCTTCCTTGTCGTCGGC
GCGGTGCAGGTCGCGGTGGTGCTGGTGGCGGCCAAGCTTCTGTTCGATATCCCGTTCGTTGGCAGCCTGACGCTGCTGTT
GTCGTCGGTGCTTGTCTTCGTGCTGTCGCTGGTGCTGCTCGGCTACACCATCTCGACCATGGCCCGCTCGCAGATGCAGG
CGATGCAGCTCACCTTCTTTTTCTTCCTGCCGTCGCTGCTGTTGTCCGGCTTCATGTTCCCCTATCGCGGCATGCCGGGC
TGGGCCCAGGCGCTGGGCGAAATCTTCCCGCTGACGCATTTCCTGCGCATCACCCGATCGGTGATGCTGAAGGGCGCCGA
CTTCCACGCCATCGCTACCGAGGTCGGCTGGCTGGCCGTGTTCGTGCTGGTCTTCGCGGGCACCGCGCTGCTGCGGTTCA
GGCGCACGCTGGACTGA

Upstream 100 bases:

>100_bases
ATATCGAGAAGGAGCATAAGGGCGTGACGGTGGCGCCGGGCGAAACCAGCCTGGAGGATGTCTTCATCCAGTTCATGTCG
GGGTCGAAGGACAATATGGC

Downstream 100 bases:

>100_bases
CCGCAAACGGACGCCTCAGCCCGGCCGCTGTGAGCGGCCGAGGCAGCCCGCCGGGCTGCGCCAATAGCAGGCATGGCGCA
CAGGACAAAGCGCTCAGGCG

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNSVFSFARLGALLIKEFIQMRRDRITFAMMLGVPLLQLILFGFAINNDPKGLPTALVAMSNDQYTRAMVSALQVTGYYH
FDHVTESAEEAEFLMARGDVSFVVTIPADFASRVERGDNPQILIEADATDPSAASGAISTLSTVASQALLRAQGMQAAAA
ENARQQLQVVVHHRYNPEGISQYNIVPGLLGVILQMTMVMMTAMALTRETERGTMENLLAMPSSPAEIMLGKVLPFLVVG
AVQVAVVLVAAKLLFDIPFVGSLTLLLSSVLVFVLSLVLLGYTISTMARSQMQAMQLTFFFFLPSLLLSGFMFPYRGMPG
WAQALGEIFPLTHFLRITRSVMLKGADFHAIATEVGWLAVFVLVFAGTALLRFRRTLD

Sequences:

>Translated_378_residues
MNSVFSFARLGALLIKEFIQMRRDRITFAMMLGVPLLQLILFGFAINNDPKGLPTALVAMSNDQYTRAMVSALQVTGYYH
FDHVTESAEEAEFLMARGDVSFVVTIPADFASRVERGDNPQILIEADATDPSAASGAISTLSTVASQALLRAQGMQAAAA
ENARQQLQVVVHHRYNPEGISQYNIVPGLLGVILQMTMVMMTAMALTRETERGTMENLLAMPSSPAEIMLGKVLPFLVVG
AVQVAVVLVAAKLLFDIPFVGSLTLLLSSVLVFVLSLVLLGYTISTMARSQMQAMQLTFFFFLPSLLLSGFMFPYRGMPG
WAQALGEIFPLTHFLRITRSVMLKGADFHAIATEVGWLAVFVLVFAGTALLRFRRTLD
>Mature_378_residues
MNSVFSFARLGALLIKEFIQMRRDRITFAMMLGVPLLQLILFGFAINNDPKGLPTALVAMSNDQYTRAMVSALQVTGYYH
FDHVTESAEEAEFLMARGDVSFVVTIPADFASRVERGDNPQILIEADATDPSAASGAISTLSTVASQALLRAQGMQAAAA
ENARQQLQVVVHHRYNPEGISQYNIVPGLLGVILQMTMVMMTAMALTRETERGTMENLLAMPSSPAEIMLGKVLPFLVVG
AVQVAVVLVAAKLLFDIPFVGSLTLLLSSVLVFVLSLVLLGYTISTMARSQMQAMQLTFFFFLPSLLLSGFMFPYRGMPG
WAQALGEIFPLTHFLRITRSVMLKGADFHAIATEVGWLAVFVLVFAGTALLRFRRTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=385, Percent_Identity=29.8701298701299, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1787010, Length=369, Percent_Identity=27.6422764227642, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI48994943, Length=349, Percent_Identity=28.080229226361, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI226510979, Length=358, Percent_Identity=27.9329608938547, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24650855, Length=375, Percent_Identity=23.2, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24650853, Length=375, Percent_Identity=23.2, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41341; Mature: 41341

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVFSFARLGALLIKEFIQMRRDRITFAMMLGVPLLQLILFGFAINNDPKGLPTALVAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEE
SNDQYTRAMVSALQVTGYYHFDHVTESAEEAEFLMARGDVSFVVTIPADFASRVERGDNP
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCCCC
QILIEADATDPSAASGAISTLSTVASQALLRAQGMQAAAAENARQQLQVVVHHRYNPEGI
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
SQYNIVPGLLGVILQMTMVMMTAMALTRETERGTMENLLAMPSSPAEIMLGKVLPFLVVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AVQVAVVLVAAKLLFDIPFVGSLTLLLSSVLVFVLSLVLLGYTISTMARSQMQAMQLTFF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLPSLLLSGFMFPYRGMPGWAQALGEIFPLTHFLRITRSVMLKGADFHAIATEVGWLAV
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FVLVFAGTALLRFRRTLD
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSVFSFARLGALLIKEFIQMRRDRITFAMMLGVPLLQLILFGFAINNDPKGLPTALVAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEE
SNDQYTRAMVSALQVTGYYHFDHVTESAEEAEFLMARGDVSFVVTIPADFASRVERGDNP
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCCCC
QILIEADATDPSAASGAISTLSTVASQALLRAQGMQAAAAENARQQLQVVVHHRYNPEGI
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
SQYNIVPGLLGVILQMTMVMMTAMALTRETERGTMENLLAMPSSPAEIMLGKVLPFLVVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AVQVAVVLVAAKLLFDIPFVGSLTLLLSSVLVFVLSLVLLGYTISTMARSQMQAMQLTFF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLPSLLLSGFMFPYRGMPGWAQALGEIFPLTHFLRITRSVMLKGADFHAIATEVGWLAV
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FVLVFAGTALLRFRRTLD
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]