Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13472327
Identifier: 13472327
GI number: 13472327
Start: 2093070
End: 2093474
Strand: Direct
Name: 13472327
Synonym: mlr2587
Alternate gene names: NA
Gene position: 2093070-2093474 (Clockwise)
Preceding gene: 13472322
Following gene: 13472328
Centisome position: 29.75
GC content: 63.21
Gene sequence:
>405_bases ATGCGGTTCATGATGCTGATGATCCCCGGCGGCTATGCAGAGGCGGCGCCCGACGTCAGGCCCGACGCCAAGGGGGTAGA GGCAATGATGAAATACAATGAGGAGCTCAAGAAGGCCGGCGTGTTGCTGGCGCTCGATGGGCTGCATCCGCCGTCATCGG GCGCGCGTGTGAGCTTCAAGGGCGGCAAGCCCGTCGTCACCGACGGGCCGTTCGCCGAGGTCAAGGAAGTGCTCGGCGGC TATTGGGTGATCGACGTCCGCTCGCGTGAAGAAGCCATCGAATGGGCCCGCCGCTGCCCCGCTGGGGAGAATGACCTGAT CGAGGTTCGACGCGTCTTTGAGATGAGCGATTTCCCCGAGGACGTCCAGAAGGTGGCGGAAGGCTTTGGCGAGCTGAAGA GTTGA
Upstream 100 bases:
>100_bases CGGTCAGGGGTAATCGCGATTCGAACTTTTTGCGGCACCTGTCGATTCCGCCACCCTTCGTTCGTCGTATGATCGACCCA ACCCAACCAAGGAGAAGACC
Downstream 100 bases:
>100_bases CCGCCACAGCCACCATCGAAGCAGTCTGGCGGATCGAGCAGCCGAAGCTCACCGCCAGGCTTGCCCGCTATCTCAGGGAT ATCGGGCTGGCCGAGGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: YCII-Related Protein; YCII-Like Protein; YCII-Related; DGPF Domain-Containing Protein; DGPFAETKE Domain-Containing Protein; Dgpfaetke Family Protein; Dgpfaetke; DGPF Domain-Containing; DGPF Protein; Histidine Kinase; DGPF Domain Family; DGPF Domain Protein; Dgpfaetke-Domain Containing Protein; Dgpfaetke Domain; Dgpf Family Protein; Transcription Regulation Protein; Dgpf Domain Protein; Dgpfaetke Domain-Containing Protein; Glutathione S-Transferase; Dgpf Domain-Containing Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRFMMLMIPGGYAEAAPDVRPDAKGVEAMMKYNEELKKAGVLLALDGLHPPSSGARVSFKGGKPVVTDGPFAEVKEVLGG YWVIDVRSREEAIEWARRCPAGENDLIEVRRVFEMSDFPEDVQKVAEGFGELKS
Sequences:
>Translated_134_residues MRFMMLMIPGGYAEAAPDVRPDAKGVEAMMKYNEELKKAGVLLALDGLHPPSSGARVSFKGGKPVVTDGPFAEVKEVLGG YWVIDVRSREEAIEWARRCPAGENDLIEVRRVFEMSDFPEDVQKVAEGFGELKS >Mature_134_residues MRFMMLMIPGGYAEAAPDVRPDAKGVEAMMKYNEELKKAGVLLALDGLHPPSSGARVSFKGGKPVVTDGPFAEVKEVLGG YWVIDVRSREEAIEWARRCPAGENDLIEVRRVFEMSDFPEDVQKVAEGFGELKS
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14774; Mature: 14774
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFMMLMIPGGYAEAAPDVRPDAKGVEAMMKYNEELKKAGVLLALDGLHPPSSGARVSFK CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEC GGKPVVTDGPFAEVKEVLGGYWVIDVRSREEAIEWARRCPAGENDLIEVRRVFEMSDFPE CCCCCCCCCCHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH DVQKVAEGFGELKS HHHHHHHHHHHCCC >Mature Secondary Structure MRFMMLMIPGGYAEAAPDVRPDAKGVEAMMKYNEELKKAGVLLALDGLHPPSSGARVSFK CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEC GGKPVVTDGPFAEVKEVLGGYWVIDVRSREEAIEWARRCPAGENDLIEVRRVFEMSDFPE CCCCCCCCCCHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH DVQKVAEGFGELKS HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA