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The map label for this gene is 13472328

Identifier: 13472328

GI number: 13472328

Start: 2093471

End: 2094712

Strand: Direct

Name: 13472328

Synonym: mlr2588

Alternate gene names: NA

Gene position: 2093471-2094712 (Clockwise)

Preceding gene: 13472327

Following gene: 13472333

Centisome position: 29.75

GC content: 68.68

Gene sequence:

>1242_bases
TTGACCGCCACAGCCACCATCGAAGCAGTCTGGCGGATCGAGCAGCCGAAGCTCACCGCCAGGCTTGCCCGCTATCTCAG
GGATATCGGGCTGGCCGAGGAGATCGCCGGCGATGCCTTCCTGCTGGCGCTGGAACGCTGGCCTCGGGACGGCATCCCGC
GCAACCCGGCCGCCTGGTTGACGGAGGTCGCCAGGAACCGGGCGCTCGACCGGCTGCGCCGCACCACCATGATCGACGGC
AAGCATCGCGAACTTGCCATCGACCTTGCCGAGCTGGAGCGCGAAATGCCCGACATCGAGGCAGCGCTCGACGAGGACAT
CGACGACGATCTTTTGCGGCTGATCTTCACCGCTTGCCATCCCGTCCTGCCGGCCGAGCAGCGCGCAGCCCTCGCCCTGC
GCCTGTTGGGCGGGCTGTCGACGCTTGAGATCGCCCGCGCCTTCCTGGTGCCCGAAGCCACCGCCGCCCAGCGCATCGTG
CGCGCCAAGCGGGCGCTCCGCGATGCCGCCATCCCGTTCGAGACGCCGCGCGGGCAGGAGCGGCGCGAACGCCTCGCCGC
CGTGCTGGAGGTGGTCTATCTCATCTTCAACGGAGGCTATGTGGCGACCGCTGGACCGGACTGGCTGCGCGCCGATCTCT
GTGGCGAGGCGCTGCGCCTCGGCCGTTCCCTTGCGGCGCTGATGCCTGACGAGCCCGAGGTGCAGGGGCTGGTGTCGCTG
ATGGAACTCAACGCCTCGCGCTTCCCTGCCCGCACCGGCAAAGCGGGTGAGCCGATCCTGCTGCTCGACCAGGACCGCAC
CCGATGGAACTGGTCGCTCATCCGGCGCGGCCTCGACGGCCTGAACCGCGCCATGACCCTGACATCGACACCCGGCCCCT
ATCTCTTGCAGGCGATGATCGCCGCCTGCCATGCCCGCGCGATGACATCAGCCGACACCGACTGGATTGCGATATCAGCC
TATTATCAGGCGCTTGCCTTGGCGGCCCCCTCGCCCATCGTCGAAATCAACCGGGCGGTGGCCGTCGGCATGGCGTTCGG
ACCGGCGCAGGGCCTCGCCATCGTCGAGGCGCTGAAGGACGAGCCGCGCCTGAAGGACTCGCATCTCCTGCCCACGGTGC
GCGGCGATCTTCTGGAAAAACTGGGACATCAGACGGAAGCCCGCGCCGCGTTCCGCCAGGCCGCAGAATTGACCGGCAAT
GACAGGGAACGCGCGCTGCTGCTCGCCCGCGCGGGCGACTAG

Upstream 100 bases:

>100_bases
CTGGGGAGAATGACCTGATCGAGGTTCGACGCGTCTTTGAGATGAGCGATTTCCCCGAGGACGTCCAGAAGGTGGCGGAA
GGCTTTGGCGAGCTGAAGAG

Downstream 100 bases:

>100_bases
CCCATCGGCCTGCATCCATCCGCAAGCCGGTGCGGTGGTCCACCTCAATGGGCGTCCGGCGGCGGTGCCTTTGGCGTGAC
GTTGCGCAGGAACGGTACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTATATIEAVWRIEQPKLTARLARYLRDIGLAEEIAGDAFLLALERWPRDGIPRNPAAWLTEVARNRALDRLRRTTMIDG
KHRELAIDLAELEREMPDIEAALDEDIDDDLLRLIFTACHPVLPAEQRAALALRLLGGLSTLEIARAFLVPEATAAQRIV
RAKRALRDAAIPFETPRGQERRERLAAVLEVVYLIFNGGYVATAGPDWLRADLCGEALRLGRSLAALMPDEPEVQGLVSL
MELNASRFPARTGKAGEPILLLDQDRTRWNWSLIRRGLDGLNRAMTLTSTPGPYLLQAMIAACHARAMTSADTDWIAISA
YYQALALAAPSPIVEINRAVAVGMAFGPAQGLAIVEALKDEPRLKDSHLLPTVRGDLLEKLGHQTEARAAFRQAAELTGN
DRERALLLARAGD

Sequences:

>Translated_413_residues
MTATATIEAVWRIEQPKLTARLARYLRDIGLAEEIAGDAFLLALERWPRDGIPRNPAAWLTEVARNRALDRLRRTTMIDG
KHRELAIDLAELEREMPDIEAALDEDIDDDLLRLIFTACHPVLPAEQRAALALRLLGGLSTLEIARAFLVPEATAAQRIV
RAKRALRDAAIPFETPRGQERRERLAAVLEVVYLIFNGGYVATAGPDWLRADLCGEALRLGRSLAALMPDEPEVQGLVSL
MELNASRFPARTGKAGEPILLLDQDRTRWNWSLIRRGLDGLNRAMTLTSTPGPYLLQAMIAACHARAMTSADTDWIAISA
YYQALALAAPSPIVEINRAVAVGMAFGPAQGLAIVEALKDEPRLKDSHLLPTVRGDLLEKLGHQTEARAAFRQAAELTGN
DRERALLLARAGD
>Mature_412_residues
TATATIEAVWRIEQPKLTARLARYLRDIGLAEEIAGDAFLLALERWPRDGIPRNPAAWLTEVARNRALDRLRRTTMIDGK
HRELAIDLAELEREMPDIEAALDEDIDDDLLRLIFTACHPVLPAEQRAALALRLLGGLSTLEIARAFLVPEATAAQRIVR
AKRALRDAAIPFETPRGQERRERLAAVLEVVYLIFNGGYVATAGPDWLRADLCGEALRLGRSLAALMPDEPEVQGLVSLM
ELNASRFPARTGKAGEPILLLDQDRTRWNWSLIRRGLDGLNRAMTLTSTPGPYLLQAMIAACHARAMTSADTDWIAISAY
YQALALAAPSPIVEINRAVAVGMAFGPAQGLAIVEALKDEPRLKDSHLLPTVRGDLLEKLGHQTEARAAFRQAAELTGND
RERALLLARAGD

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 45438; Mature: 45307

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATATIEAVWRIEQPKLTARLARYLRDIGLAEEIAGDAFLLALERWPRDGIPRNPAAWL
CCCCCEEHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCHHHHH
TEVARNRALDRLRRTTMIDGKHRELAIDLAELEREMPDIEAALDEDIDDDLLRLIFTACH
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHC
PVLPAEQRAALALRLLGGLSTLEIARAFLVPEATAAQRIVRAKRALRDAAIPFETPRGQE
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH
RRERLAAVLEVVYLIFNGGYVATAGPDWLRADLCGEALRLGRSLAALMPDEPEVQGLVSL
HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MELNASRFPARTGKAGEPILLLDQDRTRWNWSLIRRGLDGLNRAMTLTSTPGPYLLQAMI
HHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH
AACHARAMTSADTDWIAISAYYQALALAAPSPIVEINRAVAVGMAFGPAQGLAIVEALKD
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHC
EPRLKDSHLLPTVRGDLLEKLGHQTEARAAFRQAAELTGNDRERALLLARAGD
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHEEEEEECCC
>Mature Secondary Structure 
TATATIEAVWRIEQPKLTARLARYLRDIGLAEEIAGDAFLLALERWPRDGIPRNPAAWL
CCCCEEHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCCCCCCHHHHH
TEVARNRALDRLRRTTMIDGKHRELAIDLAELEREMPDIEAALDEDIDDDLLRLIFTACH
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHC
PVLPAEQRAALALRLLGGLSTLEIARAFLVPEATAAQRIVRAKRALRDAAIPFETPRGQE
CCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHH
RRERLAAVLEVVYLIFNGGYVATAGPDWLRADLCGEALRLGRSLAALMPDEPEVQGLVSL
HHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MELNASRFPARTGKAGEPILLLDQDRTRWNWSLIRRGLDGLNRAMTLTSTPGPYLLQAMI
HHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH
AACHARAMTSADTDWIAISAYYQALALAAPSPIVEINRAVAVGMAFGPAQGLAIVEALKD
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHC
EPRLKDSHLLPTVRGDLLEKLGHQTEARAAFRQAAELTGNDRERALLLARAGD
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]