| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472000
Identifier: 13472000
GI number: 13472000
Start: 1751610
End: 1752077
Strand: Reverse
Name: 13472000
Synonym: mll2156
Alternate gene names: NA
Gene position: 1752077-1751610 (Counterclockwise)
Preceding gene: 13472006
Following gene: 13471998
Centisome position: 24.9
GC content: 66.03
Gene sequence:
>468_bases GTGGGCCTTGCGCCCGTGACGGGTTCTCCAGACTCCGCGCCGATCGTCAAGACCGTAGCCATCGATGCAGCGCCGGCTGA GGTCTGGCACATGCTGACGATGCCCGCGATGATCCCGCAATGGATGTCCGACGAGGGACTGACCGTCAGCCTGGAGGGGC ATGCCGGCGGCGCGGTCGTGATACGCGGGCTGCTGCATGGCATGGCGTTCGAGAACCGTGGCATTGTCCGCGCGTTCCAG CCGGAGCGGGTGTTCTCCTACAGTTACTGGAGCACGCTGTCGGCCTCGCGCCTGGCGGACGTGCCCGAGAACCACACGCG GGTCAGTTTCGCCCTGACTGCAGCGAATGGGGGAACGCTGCTGACGCTGACGCTCAGCGACTTCGCCGAACCGGCGATCC GTCCGCATGCCAATCTCTATTGGGGGCCGACCTTGCAGATCCTGAAGGCGGTGTGCGAGCGGCGTTGA
Upstream 100 bases:
>100_bases TGCAAACTATGGTCTCTCGAATGATCCGGCGGGCGAACGCCGTGCCTTTGGCGGCTTGCGACGCCTGGCGTGATCCTGGC CACGTTGCTGCCGCCATCGC
Downstream 100 bases:
>100_bases GGAGGCGCCATCGCAGTGGCGCCGGTCTTTACCTCAGGCGCTTGGCCAGCGAGCGGATGCGGTCGGCGACCTCGCTGTCG ACCGGGTTGTAGACGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MGLAPVTGSPDSAPIVKTVAIDAAPAEVWHMLTMPAMIPQWMSDEGLTVSLEGHAGGAVVIRGLLHGMAFENRGIVRAFQ PERVFSYSYWSTLSASRLADVPENHTRVSFALTAANGGTLLTLTLSDFAEPAIRPHANLYWGPTLQILKAVCERR
Sequences:
>Translated_155_residues MGLAPVTGSPDSAPIVKTVAIDAAPAEVWHMLTMPAMIPQWMSDEGLTVSLEGHAGGAVVIRGLLHGMAFENRGIVRAFQ PERVFSYSYWSTLSASRLADVPENHTRVSFALTAANGGTLLTLTLSDFAEPAIRPHANLYWGPTLQILKAVCERR >Mature_154_residues GLAPVTGSPDSAPIVKTVAIDAAPAEVWHMLTMPAMIPQWMSDEGLTVSLEGHAGGAVVIRGLLHGMAFENRGIVRAFQP ERVFSYSYWSTLSASRLADVPENHTRVSFALTAANGGTLLTLTLSDFAEPAIRPHANLYWGPTLQILKAVCERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16712; Mature: 16581
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAPVTGSPDSAPIVKTVAIDAAPAEVWHMLTMPAMIPQWMSDEGLTVSLEGHAGGAVV CCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH IRGLLHGMAFENRGIVRAFQPERVFSYSYWSTLSASRLADVPENHTRVSFALTAANGGTL HHHHHHHHCCCCCCEEEEECCCCEEEEHHHHHCCHHHHHCCCCCCCEEEEEEEECCCCEE LTLTLSDFAEPAIRPHANLYWGPTLQILKAVCERR EEEEHHHHCCCCCCCCCCEEECHHHHHHHHHHCCC >Mature Secondary Structure GLAPVTGSPDSAPIVKTVAIDAAPAEVWHMLTMPAMIPQWMSDEGLTVSLEGHAGGAVV CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH IRGLLHGMAFENRGIVRAFQPERVFSYSYWSTLSASRLADVPENHTRVSFALTAANGGTL HHHHHHHHCCCCCCEEEEECCCCEEEEHHHHHCCHHHHHCCCCCCCEEEEEEEECCCCEE LTLTLSDFAEPAIRPHANLYWGPTLQILKAVCERR EEEEHHHHCCCCCCCCCCEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA