| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yfcH [C]
Identifier: 13471998
GI number: 13471998
Start: 1749776
End: 1750660
Strand: Reverse
Name: yfcH [C]
Synonym: mll2153
Alternate gene names: 13471998
Gene position: 1750660-1749776 (Counterclockwise)
Preceding gene: 13472000
Following gene: 13471994
Centisome position: 24.88
GC content: 68.25
Gene sequence:
>885_bases ATGCGTATCTTTTTGACCGGCGCCACCGGCTTCATCGGCTCGGCGCTCGTTCCCGAACTCATCCAGGCCGGCCATCAGGT GATCGGCGTCACCCGCTCCGATGCCGGCGCCGAGGCGCTGGCGGCCGCGGGCGCCGAAGTGCATCGCGGAACCCTTGAGG ATCCGACAAGCCTGCGCAGCGGCGCGGCCGAAGCGGACGCCGTGATCCACACCGCCTTCGACCATGATTTCTCGCGCTTT GCCGAGAACTGCGAAAAGGACAAGCGCGTGATCGCGGCACTCGGCCAGGCATTGGCCGGATCCGACCGGCCGCTGGTGAT CACGTCGGGCGTCGGCATGGGCAGCCCCGGACATGGCCAACTGGCGGTCGAGGACGTCTTCAACGCCAGCCATCCCAATC CGCGCATCGCCTCGGAACTCGCCGGCAATGCCTTGCTGGAGGCCGGCATCAATTTGTCGGTCGTGCGGCTGCCGCAGGTG CACAATCCGGTCAAGCAGGGGCTGATCTCGCCGCTGATCGAGATCGCGCGCGACAAGGGCGTCTCGGCCTATGTCGGCGA AGGCCGCAATCGCTATTCGGCGGGGCATCTCTCCGACGCCGCGCGGCTCTACCGGCTTGCCGTGGAAAAGCGCCAGCCGG GCGCGCGCTACCATGCGGTCGGCGAGGAAGGCGTCGAGGTGCGCGCCATCGCCGAGGCGCTTGGCCGGGGCCTCAAATTG CCGGTCGTCTCCATCGCGCCGGAACAGGCGGCGCAGCACTTCGGCTGGATGGGAATGTTTGCCCCGATGGACCTGCCGGC CTCAAGCGCGCTGACCCAGGCGCGGCTCGGCTGGCATCCGACCGGCCCGACGCTGATCGCCGATCTCGACGCCATGCGCT ATTGA
Upstream 100 bases:
>100_bases TGTTAGCCATCCTGTTAAAGATTATACCATGATAAGATCACTACTTTAATGGAATAATAGACCGGGGATACTGCGCGGGC AACTGTGCAGGAGATTTTGC
Downstream 100 bases:
>100_bases TGGGCTGCGGCCTCAGCCAGGGCTGACGGCGTAGCGCAAGTGGATGAGCCCATGCGCCAGTGTTTCGCAGCTTGTCAGCG ACAGCTGCATCTTGCCGGCG
Product: dyhydroflavanol-4-reductase
Products: NA
Alternate protein names: Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase; Epimerase/Dehydratase; Polysaccharide Synthesis Protein; Nucleoside-Diphosphate-Sugar Epimerase Dehydratase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; UDP-Glucose 4-Epimerase; Dyhydroflavanol-4-Reductase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Dehydratase; Nucleoside-Diphosphate-Sugar Epimerases; Signal Peptide; Hopanoid-Associated Sugar Epimerase; Dyhydroflavanol-4-Reductas; Male Sterility Protein-Like Protein; 3-Beta Hydroxysteroid Dehydrogenase
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MRIFLTGATGFIGSALVPELIQAGHQVIGVTRSDAGAEALAAAGAEVHRGTLEDPTSLRSGAAEADAVIHTAFDHDFSRF AENCEKDKRVIAALGQALAGSDRPLVITSGVGMGSPGHGQLAVEDVFNASHPNPRIASELAGNALLEAGINLSVVRLPQV HNPVKQGLISPLIEIARDKGVSAYVGEGRNRYSAGHLSDAARLYRLAVEKRQPGARYHAVGEEGVEVRAIAEALGRGLKL PVVSIAPEQAAQHFGWMGMFAPMDLPASSALTQARLGWHPTGPTLIADLDAMRY
Sequences:
>Translated_294_residues MRIFLTGATGFIGSALVPELIQAGHQVIGVTRSDAGAEALAAAGAEVHRGTLEDPTSLRSGAAEADAVIHTAFDHDFSRF AENCEKDKRVIAALGQALAGSDRPLVITSGVGMGSPGHGQLAVEDVFNASHPNPRIASELAGNALLEAGINLSVVRLPQV HNPVKQGLISPLIEIARDKGVSAYVGEGRNRYSAGHLSDAARLYRLAVEKRQPGARYHAVGEEGVEVRAIAEALGRGLKL PVVSIAPEQAAQHFGWMGMFAPMDLPASSALTQARLGWHPTGPTLIADLDAMRY >Mature_294_residues MRIFLTGATGFIGSALVPELIQAGHQVIGVTRSDAGAEALAAAGAEVHRGTLEDPTSLRSGAAEADAVIHTAFDHDFSRF AENCEKDKRVIAALGQALAGSDRPLVITSGVGMGSPGHGQLAVEDVFNASHPNPRIASELAGNALLEAGINLSVVRLPQV HNPVKQGLISPLIEIARDKGVSAYVGEGRNRYSAGHLSDAARLYRLAVEKRQPGARYHAVGEEGVEVRAIAEALGRGLKL PVVSIAPEQAAQHFGWMGMFAPMDLPASSALTQARLGWHPTGPTLIADLDAMRY
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322972, Length=295, Percent_Identity=38.6440677966102, Blast_Score=206, Evalue=3e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30850; Mature: 30850
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFLTGATGFIGSALVPELIQAGHQVIGVTRSDAGAEALAAAGAEVHRGTLEDPTSLRS CEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCHHHHCCCCCCCHHHHC GAAEADAVIHTAFDHDFSRFAENCEKDKRVIAALGQALAGSDRPLVITSGVGMGSPGHGQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC LAVEDVFNASHPNPRIASELAGNALLEAGINLSVVRLPQVHNPVKQGLISPLIEIARDKG EEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHCCHHHHHHHHHHHHHHHCCC VSAYVGEGRNRYSAGHLSDAARLYRLAVEKRQPGARYHAVGEEGVEVRAIAEALGRGLKL CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCC PVVSIAPEQAAQHFGWMGMFAPMDLPASSALTQARLGWHPTGPTLIADLDAMRY CEEEECHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCCCCCHHEECHHHHCC >Mature Secondary Structure MRIFLTGATGFIGSALVPELIQAGHQVIGVTRSDAGAEALAAAGAEVHRGTLEDPTSLRS CEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCHHHHCCCCCCCHHHHC GAAEADAVIHTAFDHDFSRFAENCEKDKRVIAALGQALAGSDRPLVITSGVGMGSPGHGQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC LAVEDVFNASHPNPRIASELAGNALLEAGINLSVVRLPQVHNPVKQGLISPLIEIARDKG EEHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHCCHHHHHHHHHHHHHHHCCC VSAYVGEGRNRYSAGHLSDAARLYRLAVEKRQPGARYHAVGEEGVEVRAIAEALGRGLKL CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCC PVVSIAPEQAAQHFGWMGMFAPMDLPASSALTQARLGWHPTGPTLIADLDAMRY CEEEECHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCCCCCHHEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA