| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471114
Identifier: 13471114
GI number: 13471114
Start: 825393
End: 825683
Strand: Reverse
Name: 13471114
Synonym: msl0999
Alternate gene names: NA
Gene position: 825683-825393 (Counterclockwise)
Preceding gene: 13471115
Following gene: 13471113
Centisome position: 11.74
GC content: 59.45
Gene sequence:
>291_bases GTGGTCATGCACGAGGCCGTCAAACGACCAAGCGACGTGAGCGAACTCAAAGGCATGATTGCCTCACGGACGATCACACT TCCGGAGCAGCAGGAACAAGTTGCTCGGATGGCACTGGCGAAGCCAGACGTGATAGCTTTTGGCACCGTCGGCTCGATTG CCGCCGAATGCTCCGTCTCGCCCTCTACGGTGGTGCGCGCCGCCACGGGCCTCGGTTTCGCCGATTTTCGAGACTTCAGG CGTTTTTTTCGGCTGCACCTACGGAAGGCAACAAGCCTGAACGCTGGTTAG
Upstream 100 bases:
>100_bases CGCGCGCAACGCTCTAAAAATTGCGCTTGCCTGCATCGAGTCCGTCTCGAAGAAGCAAGCCATTCCGCTGCGATAGAAGC TTCTGGAGCTACAGAGGAGT
Downstream 100 bases:
>100_bases CTCCAACGAATGCAGGGATGGATCGGTCAGCGTCAGTCGTGTAGCATTGAAATTATTGAGGAATTTTGTCCGAGAGCGCT ACCAAATTGCGCATAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MVMHEAVKRPSDVSELKGMIASRTITLPEQQEQVARMALAKPDVIAFGTVGSIAAECSVSPSTVVRAATGLGFADFRDFR RFFRLHLRKATSLNAG
Sequences:
>Translated_96_residues MVMHEAVKRPSDVSELKGMIASRTITLPEQQEQVARMALAKPDVIAFGTVGSIAAECSVSPSTVVRAATGLGFADFRDFR RFFRLHLRKATSLNAG >Mature_96_residues MVMHEAVKRPSDVSELKGMIASRTITLPEQQEQVARMALAKPDVIAFGTVGSIAAECSVSPSTVVRAATGLGFADFRDFR RFFRLHLRKATSLNAG
Specific function: Unknown
COG id: COG1737
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10421; Mature: 10421
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMHEAVKRPSDVSELKGMIASRTITLPEQQEQVARMALAKPDVIAFGTVGSIAAECSVS CCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCC PSTVVRAATGLGFADFRDFRRFFRLHLRKATSLNAG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVMHEAVKRPSDVSELKGMIASRTITLPEQQEQVARMALAKPDVIAFGTVGSIAAECSVS CCCCHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCC PSTVVRAATGLGFADFRDFRRFFRLHLRKATSLNAG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA