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The map label for this gene is virA [H]

Identifier: 13471113

GI number: 13471113

Start: 823807

End: 824655

Strand: Reverse

Name: virA [H]

Synonym: mll0997

Alternate gene names: 13471113

Gene position: 824655-823807 (Counterclockwise)

Preceding gene: 13471114

Following gene: 13471112

Centisome position: 11.72

GC content: 57.24

Gene sequence:

>849_bases
GTGTCCGAAAGGGTGCCGGTTTCATACCCGGGCATAATAGCGCGCCGGGCTTGCTCTGTTGTTAGGTTGGAGTGCCGTCG
GAGAGTTCAGAACGGCGTCAAGGAGATAACCATGCGAGAATATACGTCCTCGCAATTCAGTCCAGATGGGTCGGTTCCTC
CGTCTATGGACCCGCACCTGTGGTCATCGATCGTTCATGATTTCAACAACCTGCTCACGCCGGTGATGATTGCCCTGGAA
GATTTGCAGCGCCGCCGCGCCGGCACCTCGAGAGAACTCGGAAAGATCGATGCTGCGATCTACTGCGCGTTTCGAGCGAA
AGTTCTCGCCCGCCAACTTCTTGCGAATGCGCGACCACCACGGCAGGAGCTGACGGATATTTGCCAACTGCTTGAGCAGT
TCCAGGTCGTACTTGCGAACGTCCTCTCACCGAGCATCAGGCTGACTCTGCACGTAGCGGGGAGTCTTCCGCTGGCCTTC
ATCGACCGAGAGCTCGTCGAACGAGCACTTCTCAATCTCGTCCTCAATGCACGCGATGCGATGCCTGCTGGCGGCGACAT
ATCCATTGCCGCGGCCTTGGAGTTTCCACCTTCGAGCAAAACTGGTCCGCCAAAACAGATGATCCGGCTGTCCATCTCTG
ACAACGGCGTCGGGATGGATGACGGGACACTCAAAATGGCGGGTCGGAAGAATTTCTCAACAAAGGCGAACGGAAGTGGC
CTTGGCCTCGCGGTCGTCAGGCGGATCGTGGAGAGCTTGAGCGGCAGATTCTCGATCATTAGCACCCTCGGCCATGGCAC
CACGATCGATCTGTGGCTGCCAGCAATTTCCGCGGATTTGAGAAACTGA

Upstream 100 bases:

>100_bases
GAGCCGACTCCTTCGCAGTCTACCCTTGCTGTCGCGCTCTGCGTGAATGGCCTCGTCCAACCCCAAAAGACCTCTCTGTT
GTCGATTCTGGTAAATAGAT

Downstream 100 bases:

>100_bases
ATTCAAACCAGCCAAGATGGAATGCAACGATGGAACTTTCTGCTCTACTCGCAAAATGCTTGGCGGCACTTCGCCAGTTC
GTGGCACCTCGCTACAGGCC

Product: robable sensor/response regulator hybrid

Products: NA

Alternate protein names: WHR virA [H]

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSERVPVSYPGIIARRACSVVRLECRRRVQNGVKEITMREYTSSQFSPDGSVPPSMDPHLWSSIVHDFNNLLTPVMIALE
DLQRRRAGTSRELGKIDAAIYCAFRAKVLARQLLANARPPRQELTDICQLLEQFQVVLANVLSPSIRLTLHVAGSLPLAF
IDRELVERALLNLVLNARDAMPAGGDISIAAALEFPPSSKTGPPKQMIRLSISDNGVGMDDGTLKMAGRKNFSTKANGSG
LGLAVVRRIVESLSGRFSIISTLGHGTTIDLWLPAISADLRN

Sequences:

>Translated_282_residues
MSERVPVSYPGIIARRACSVVRLECRRRVQNGVKEITMREYTSSQFSPDGSVPPSMDPHLWSSIVHDFNNLLTPVMIALE
DLQRRRAGTSRELGKIDAAIYCAFRAKVLARQLLANARPPRQELTDICQLLEQFQVVLANVLSPSIRLTLHVAGSLPLAF
IDRELVERALLNLVLNARDAMPAGGDISIAAALEFPPSSKTGPPKQMIRLSISDNGVGMDDGTLKMAGRKNFSTKANGSG
LGLAVVRRIVESLSGRFSIISTLGHGTTIDLWLPAISADLRN
>Mature_281_residues
SERVPVSYPGIIARRACSVVRLECRRRVQNGVKEITMREYTSSQFSPDGSVPPSMDPHLWSSIVHDFNNLLTPVMIALED
LQRRRAGTSRELGKIDAAIYCAFRAKVLARQLLANARPPRQELTDICQLLEQFQVVLANVLSPSIRLTLHVAGSLPLAFI
DRELVERALLNLVLNARDAMPAGGDISIAAALEFPPSSKTGPPKQMIRLSISDNGVGMDDGTLKMAGRKNFSTKANGSGL
GLAVVRRIVESLSGRFSIISTLGHGTTIDLWLPAISADLRN

Specific function: Activates virG, by phosphorylating it, in the presence of acetosyringone or hydroxysyringone [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=30.7692307692308, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788549, Length=113, Percent_Identity=38.0530973451327, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 30764; Mature: 30633

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERVPVSYPGIIARRACSVVRLECRRRVQNGVKEITMREYTSSQFSPDGSVPPSMDPHL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
WSSIVHDFNNLLTPVMIALEDLQRRRAGTSRELGKIDAAIYCAFRAKVLARQLLANARPP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RQELTDICQLLEQFQVVLANVLSPSIRLTLHVAGSLPLAFIDRELVERALLNLVLNARDA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC
MPAGGDISIAAALEFPPSSKTGPPKQMIRLSISDNGVGMDDGTLKMAGRKNFSTKANGSG
CCCCCCEEEEEEEECCCCCCCCCHHHEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCC
LGLAVVRRIVESLSGRFSIISTLGHGTTIDLWLPAISADLRN
HHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEHHHHHHHCCC
>Mature Secondary Structure 
SERVPVSYPGIIARRACSVVRLECRRRVQNGVKEITMREYTSSQFSPDGSVPPSMDPHL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
WSSIVHDFNNLLTPVMIALEDLQRRRAGTSRELGKIDAAIYCAFRAKVLARQLLANARPP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RQELTDICQLLEQFQVVLANVLSPSIRLTLHVAGSLPLAFIDRELVERALLNLVLNARDA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC
MPAGGDISIAAALEFPPSSKTGPPKQMIRLSISDNGVGMDDGTLKMAGRKNFSTKANGSG
CCCCCCEEEEEEEECCCCCCCCCHHHEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCC
LGLAVVRRIVESLSGRFSIISTLGHGTTIDLWLPAISADLRN
HHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3595559 [H]