Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is yhfA [H]
Identifier: 13470916
GI number: 13470916
Start: 584153
End: 584578
Strand: Reverse
Name: yhfA [H]
Synonym: mll0741
Alternate gene names: 13470916
Gene position: 584578-584153 (Counterclockwise)
Preceding gene: 13470917
Following gene: 13470912
Centisome position: 8.31
GC content: 60.8
Gene sequence:
>426_bases GTGAAGGCACGGATAAAGTGGGTCGAAGAGCGCACCTTCATCGGCGAGTCCGGCAGCGGCCACAAGCTGGTGCTGGGAAC GGCATCCGGCCCTGATGGCAAGACGCCAGGCCCGAGCCCGATGGAACTGGTGCTGATCGGCACCGGCGGCTGCTCGGCCT ATGATGTCGTGCATATACTGGAAAAGGGTCGCGAGGCGGTCGAGGACTGCGTCGTCGAACTCGACGCCGACCGGGCCGAG ACCGACCCAAAGGTGTTCACCCGCATCCATATGCATTTCATCGTCAAGGGCAGGGCGCTGTCGTCCGACAAGGTTCAGCG CGCGATCAATCTTTCGATTGAAAAATACTGCTCGGCCTCCGCAATGATGGCCAAGACGGCGACGATCACGCATGATTTCG AGGTGATCGATACGGCGGCGAAGTGA
Upstream 100 bases:
>100_bases ACGGCTGACGTTGTGTGATCGATACGCCCCGAGGGTCCCGCATGGACTTTCGGGGTTTTGCATTGTTGATTTGGGATCAA AGGACTGAAAGGACAAAGCG
Downstream 100 bases:
>100_bases AGGGCAGTACGGCAGTAGGGACTGCCGTTCACCCCGCCATCAGCGCCTTGATGCCGTCGGCCACGAACTGCACGGCCAGC GCCGCCAAGATGACGCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKARIKWVEERTFIGESGSGHKLVLGTASGPDGKTPGPSPMELVLIGTGGCSAYDVVHILEKGREAVEDCVVELDADRAE TDPKVFTRIHMHFIVKGRALSSDKVQRAINLSIEKYCSASAMMAKTATITHDFEVIDTAAK
Sequences:
>Translated_141_residues MKARIKWVEERTFIGESGSGHKLVLGTASGPDGKTPGPSPMELVLIGTGGCSAYDVVHILEKGREAVEDCVVELDADRAE TDPKVFTRIHMHFIVKGRALSSDKVQRAINLSIEKYCSASAMMAKTATITHDFEVIDTAAK >Mature_141_residues MKARIKWVEERTFIGESGSGHKLVLGTASGPDGKTPGPSPMELVLIGTGGCSAYDVVHILEKGREAVEDCVVELDADRAE TDPKVFTRIHMHFIVKGRALSSDKVQRAINLSIEKYCSASAMMAKTATITHDFEVIDTAAK
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789755, Length=136, Percent_Identity=52.9411764705882, Blast_Score=152, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 15246; Mature: 15246
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARIKWVEERTFIGESGSGHKLVLGTASGPDGKTPGPSPMELVLIGTGGCSAYDVVHIL CCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH EKGREAVEDCVVELDADRAETDPKVFTRIHMHFIVKGRALSSDKVQRAINLSIEKYCSAS HHHHHHHHHHHEECCCCCCCCCHHHHHHEEEEEEEECCCCCHHHHHHHHCCCHHHHHCHH AMMAKTATITHDFEVIDTAAK HHHHHHEEEECCHHEEECCCC >Mature Secondary Structure MKARIKWVEERTFIGESGSGHKLVLGTASGPDGKTPGPSPMELVLIGTGGCSAYDVVHIL CCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH EKGREAVEDCVVELDADRAETDPKVFTRIHMHFIVKGRALSSDKVQRAINLSIEKYCSAS HHHHHHHHHHHEECCCCCCCCCHHHHHHEEEEEEEECCCCCHHHHHHHHCCCHHHHHCHH AMMAKTATITHDFEVIDTAAK HHHHHHEEEECCHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]