Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470861
Identifier: 13470861
GI number: 13470861
Start: 527770
End: 528489
Strand: Direct
Name: 13470861
Synonym: mlr0671
Alternate gene names: NA
Gene position: 527770-528489 (Clockwise)
Preceding gene: 13470857
Following gene: 13470868
Centisome position: 7.5
GC content: 64.86
Gene sequence:
>720_bases ATGGGCGATTCCTTCTATCTTTCGATGGCTGATCTCGGGGCACTGGCCTTCTTCCTGATCGTGTGGCTGCTGCATACGCT CGCCTCGGACGGCAAGCTGGTCAGCCGGATGTCGCTGACGACGGCGATGAATGCGCAGCGCGAAGCCTGGATGCGCACCA TGGCCGAGCGCGAAATCCGCATCGTCGACACCGCCATCATGAGCGGCCTGCAGCAGGGAACCGCCTTCTTCGCCTCCAGC TCGCTGATCGCGCTGGGCGGCTGCTTTGCCTTGCTCGGCGCATCCGACCGGGTGCTGGAAGTGCTGAGCAACCTGCCGCT CGGCGGCGCGCCGTCGCGCCCGGCCTTTCAGATCAAGGTGCTGGGGCTGGTGCTGATCCTGGCCTTTTCCTTCTTCAAAT TCGGCTGGGCCTACCGGCTGTTCAACTATTGCTCGATTCTGATCGGCGCGGTGCCGATCCCGCACGGCGAAGCCTCGCGC AATCCGGTCACGCAAACGGCAGTGTGGCGCGCGGCGCAGATGAACATGCTGGCCGGCAAGCATTTCAACTCGGGCCTGCG CGGCGTGTTCTTCTCGATCGGCTATCTCGGCTGGTTCGTCGATCCGGTGGTGTTCGTTCTGTCGACGCTTCTGCTGCTGG CCGTGCTGGTGCGGCGCCAGTTCTTCTCGGCGGCGCGACGCGCCGTCATCGGTCAGCCGCCCGGCCCCGGAAAAGGCTGA
Upstream 100 bases:
>100_bases GCGCAGCACCTGCCGACCTTGTTTGCTCCGGCAGCGACATTGCTGTCGATCGCGGGAGCCGGCATCGAAGTGACCGCGCT GGATGTGCTAAATTCAGCCC
Downstream 100 bases:
>100_bases TCGATGCGGCCGGAAAGCCAATAGGCAAAAAGCCCGATCCATTCGCGGAGCGCTATGGTGGTGTTCTGCACGGAATCGAT CGCATTGTCGCGAAACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MGDSFYLSMADLGALAFFLIVWLLHTLASDGKLVSRMSLTTAMNAQREAWMRTMAEREIRIVDTAIMSGLQQGTAFFASS SLIALGGCFALLGASDRVLEVLSNLPLGGAPSRPAFQIKVLGLVLILAFSFFKFGWAYRLFNYCSILIGAVPIPHGEASR NPVTQTAVWRAAQMNMLAGKHFNSGLRGVFFSIGYLGWFVDPVVFVLSTLLLLAVLVRRQFFSAARRAVIGQPPGPGKG
Sequences:
>Translated_239_residues MGDSFYLSMADLGALAFFLIVWLLHTLASDGKLVSRMSLTTAMNAQREAWMRTMAEREIRIVDTAIMSGLQQGTAFFASS SLIALGGCFALLGASDRVLEVLSNLPLGGAPSRPAFQIKVLGLVLILAFSFFKFGWAYRLFNYCSILIGAVPIPHGEASR NPVTQTAVWRAAQMNMLAGKHFNSGLRGVFFSIGYLGWFVDPVVFVLSTLLLLAVLVRRQFFSAARRAVIGQPPGPGKG >Mature_238_residues GDSFYLSMADLGALAFFLIVWLLHTLASDGKLVSRMSLTTAMNAQREAWMRTMAEREIRIVDTAIMSGLQQGTAFFASSS LIALGGCFALLGASDRVLEVLSNLPLGGAPSRPAFQIKVLGLVLILAFSFFKFGWAYRLFNYCSILIGAVPIPHGEASRN PVTQTAVWRAAQMNMLAGKHFNSGLRGVFFSIGYLGWFVDPVVFVLSTLLLLAVLVRRQFFSAARRAVIGQPPGPGKG
Specific function: Unknown
COG id: COG3821
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25941; Mature: 25810
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDSFYLSMADLGALAFFLIVWLLHTLASDGKLVSRMSLTTAMNAQREAWMRTMAEREIR CCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVDTAIMSGLQQGTAFFASSSLIALGGCFALLGASDRVLEVLSNLPLGGAPSRPAFQIKV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHH LGLVLILAFSFFKFGWAYRLFNYCSILIGAVPIPHGEASRNPVTQTAVWRAAQMNMLAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC HFNSGLRGVFFSIGYLGWFVDPVVFVLSTLLLLAVLVRRQFFSAARRAVIGQPPGPGKG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GDSFYLSMADLGALAFFLIVWLLHTLASDGKLVSRMSLTTAMNAQREAWMRTMAEREIR CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVDTAIMSGLQQGTAFFASSSLIALGGCFALLGASDRVLEVLSNLPLGGAPSRPAFQIKV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHH LGLVLILAFSFFKFGWAYRLFNYCSILIGAVPIPHGEASRNPVTQTAVWRAAQMNMLAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC HFNSGLRGVFFSIGYLGWFVDPVVFVLSTLLLLAVLVRRQFFSAARRAVIGQPPGPGKG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA