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The map label for this gene is rpmE2

Identifier: 15602085

GI number: 15602085

Start: 244065

End: 244331

Strand: Reverse

Name: rpmE2

Synonym: PM0220

Alternate gene names: 15602085

Gene position: 244331-244065 (Counterclockwise)

Preceding gene: 15602091

Following gene: 15602084

Centisome position: 10.82

GC content: 39.33

Gene sequence:

>267_bases
ATGAAAAAAGGTATTCATCCAGAAAATTACCGTACTGTACTATTTTATGACTCAAATGCAAAGCAAGGTTTTTTAATCCG
CTCTTGCGCCAGAACCACAACGACCATGAAATGGGAAGATGGTCATGAATATCCTGTCTTTATGTGTGATACCTCCTCAG
CATCACACCCGTACTATACAGGTAAAACACGTCAAATTGCGAATGAAGGTCGTGCAAGCGACTTTGTCAATCGCTACGGC
AAATTTGGCACATTAAAATCAAAATAA

Upstream 100 bases:

>100_bases
ACTTATTTTCCCATAAAAAATAAGTTTTGATAATTATTTCTATTTCATGTAGGATAGCCCCATTCGTTATTTTTCAGAAA
AAAATAAGAGGCACGCCAAT

Downstream 100 bases:

>100_bases
GGACACGCCCATGCAAGTATTAAGTTCATTAAAGAGTGCGAAAACACGTCATCCCGGCTGTAAGATTGTACGCCGCCATG
GGGTTGTGTATGTTATTTGC

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MKKGIHPENYRTVLFYDSNAKQGFLIRSCARTTTTMKWEDGHEYPVFMCDTSSASHPYYTGKTRQIANEGRASDFVNRYG
KFGTLKSK

Sequences:

>Translated_88_residues
MKKGIHPENYRTVLFYDSNAKQGFLIRSCARTTTTMKWEDGHEYPVFMCDTSSASHPYYTGKTRQIANEGRASDFVNRYG
KFGTLKSK
>Mature_88_residues
MKKGIHPENYRTVLFYDSNAKQGFLIRSCARTTTTMKWEDGHEYPVFMCDTSSASHPYYTGKTRQIANEGRASDFVNRYG
KFGTLKSK

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=86, Percent_Identity=45.3488372093023, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_PASMU (Q9CP41)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245157.1
- ProteinModelPortal:   Q9CP41
- SMR:   Q9CP41
- GeneID:   1243567
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0220
- NMPDR:   fig|272843.1.peg.220
- HOGENOM:   HBG610087
- OMA:   IANEGRA
- ProtClustDB:   PRK01678
- BioCyc:   PMUL272843:PM0220-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 10124; Mature: 10124

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGIHPENYRTVLFYDSNAKQGFLIRSCARTTTTMKWEDGHEYPVFMCDTSSASHPYYT
CCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCEEC
GKTRQIANEGRASDFVNRYGKFGTLKSK
CCCHHHCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKGIHPENYRTVLFYDSNAKQGFLIRSCARTTTTMKWEDGHEYPVFMCDTSSASHPYYT
CCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCEEEECCCCCCCCEEC
GKTRQIANEGRASDFVNRYGKFGTLKSK
CCCHHHCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100