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The map label for this gene is secF [H]

Identifier: 15602091

GI number: 15602091

Start: 252492

End: 253466

Strand: Reverse

Name: secF [H]

Synonym: PM0226

Alternate gene names: 15602091

Gene position: 253466-252492 (Counterclockwise)

Preceding gene: 15602092

Following gene: 15602085

Centisome position: 11.23

GC content: 40.72

Gene sequence:

>975_bases
ATTGTGAGTTTATTTACAGATAAAAAAGATGCGCCTGAATTGAGCAATATTAAACTACCCTATCGCTTAATTCACTTTAT
GGCTCACCGTAAATGGGGCTATCTACTTTCGATTTTAGTCATTGTTGCGTCACTCTTTTTCATCGTGACCAAAGGCTTTA
ACTGGGGACTCGACTTTACCGGTGGAACAGTCATTGACATGAGTTTTTCTCAGCCTGCCGAATTAGATAAAGTTCGCCTC
ACTCTTGAGCAAAAAGGTATTCAAGGGGCGATTGTACAAAACTCAGGTAGTGTGCGCGATATTATTATTCGTTTACCTGC
CGCGATCAGTGATGCCAATATTGGTAACAATATTAAAGAACTGTTTGCTGCGACGGTAGATAAAAATGTCACGGTACACA
GTATTGAGTTTGTGGGACCAAACGTAGGTGAAGAATTAACCCAATCTGCAATTTATGCGACCTTAGCGACCTTATTGATG
TTATTAGTTTATATCGGTATGCGCTTTGAATGGCGTCTAGCATTAGGGGCGGTTGCTTCATTAGCGCATGATGTGTTGGT
AACGCTTGGACTCTTTTCTTTACTGCAAATTGAAATGAACCTCACCTTTGTGGCAGCGATTCTCACTGTGGTAGGTTATT
CACTCAATGACAGTATTGTCGTCTTTGACCGTGTACGAGAAAACATCCGTAAAATTAGACGAACAGATGTTTTAGATATT
ATCAATATATCGCTGTCGCAAACGTTATCAAGAACTTTAATGACCTCCGCGACAACCATTATCGTCGTGGTTTCCTTGTT
ATTATTCGGTGGACCGAGTATTCACAGTTTTTCCGTTGCGTTATTAATTGGGATTGGTTTTGGTACCTACTCCTCTATTT
TCGTGGCAATTGCACTTGCTTATGACTTAGGCTTGAAACGCGAACATATGTTGCCACCGAAAGTGGATAACGATGCTCTT
GATGAACTCCCTTAA

Upstream 100 bases:

>100_bases
GTAGGGATTTCCATGTTTACCGCCATTGTCGGCACACGTGCAATCGTCAACTTCTTGTACGGCGGTAAACGTATAAACAA
ATTGTCAATTTAGCGAGGAT

Downstream 100 bases:

>100_bases
GCGAACTTAACTAAGTGCGGTCTGAAATTGAAAAATTTCAGACCGTTTTTTTATTTTGTCTATTTACGGCTATCAAAAGA
TTAAGGCAAAAAAATAAGCG

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MVSLFTDKKDAPELSNIKLPYRLIHFMAHRKWGYLLSILVIVASLFFIVTKGFNWGLDFTGGTVIDMSFSQPAELDKVRL
TLEQKGIQGAIVQNSGSVRDIIIRLPAAISDANIGNNIKELFAATVDKNVTVHSIEFVGPNVGEELTQSAIYATLATLLM
LLVYIGMRFEWRLALGAVASLAHDVLVTLGLFSLLQIEMNLTFVAAILTVVGYSLNDSIVVFDRVRENIRKIRRTDVLDI
INISLSQTLSRTLMTSATTIIVVVSLLLFGGPSIHSFSVALLIGIGFGTYSSIFVAIALAYDLGLKREHMLPPKVDNDAL
DELP

Sequences:

>Translated_324_residues
MVSLFTDKKDAPELSNIKLPYRLIHFMAHRKWGYLLSILVIVASLFFIVTKGFNWGLDFTGGTVIDMSFSQPAELDKVRL
TLEQKGIQGAIVQNSGSVRDIIIRLPAAISDANIGNNIKELFAATVDKNVTVHSIEFVGPNVGEELTQSAIYATLATLLM
LLVYIGMRFEWRLALGAVASLAHDVLVTLGLFSLLQIEMNLTFVAAILTVVGYSLNDSIVVFDRVRENIRKIRRTDVLDI
INISLSQTLSRTLMTSATTIIVVVSLLLFGGPSIHSFSVALLIGIGFGTYSSIFVAIALAYDLGLKREHMLPPKVDNDAL
DELP
>Mature_324_residues
MVSLFTDKKDAPELSNIKLPYRLIHFMAHRKWGYLLSILVIVASLFFIVTKGFNWGLDFTGGTVIDMSFSQPAELDKVRL
TLEQKGIQGAIVQNSGSVRDIIIRLPAAISDANIGNNIKELFAATVDKNVTVHSIEFVGPNVGEELTQSAIYATLATLLM
LLVYIGMRFEWRLALGAVASLAHDVLVTLGLFSLLQIEMNLTFVAAILTVVGYSLNDSIVVFDRVRENIRKIRRTDVLDI
INISLSQTLSRTLMTSATTIIVVVSLLLFGGPSIHSFSVALLIGIGFGTYSSIFVAIALAYDLGLKREHMLPPKVDNDAL
DELP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=304, Percent_Identity=49.3421052631579, Blast_Score=313, Evalue=7e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35553; Mature: 35553

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLFTDKKDAPELSNIKLPYRLIHFMAHRKWGYLLSILVIVASLFFIVTKGFNWGLDFT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GGTVIDMSFSQPAELDKVRLTLEQKGIQGAIVQNSGSVRDIIIRLPAAISDANIGNNIKE
CCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHEEECCCCCCCCCCCHHHHH
LFAATVDKNVTVHSIEFVGPNVGEELTQSAIYATLATLLMLLVYIGMRFEWRLALGAVAS
HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
LAHDVLVTLGLFSLLQIEMNLTFVAAILTVVGYSLNDSIVVFDRVRENIRKIRRTDVLDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
INISLSQTLSRTLMTSATTIIVVVSLLLFGGPSIHSFSVALLIGIGFGTYSSIFVAIALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
YDLGLKREHMLPPKVDNDALDELP
HHHCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MVSLFTDKKDAPELSNIKLPYRLIHFMAHRKWGYLLSILVIVASLFFIVTKGFNWGLDFT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GGTVIDMSFSQPAELDKVRLTLEQKGIQGAIVQNSGSVRDIIIRLPAAISDANIGNNIKE
CCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHEEECCCCCCCCCCCHHHHH
LFAATVDKNVTVHSIEFVGPNVGEELTQSAIYATLATLLMLLVYIGMRFEWRLALGAVAS
HHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHH
LAHDVLVTLGLFSLLQIEMNLTFVAAILTVVGYSLNDSIVVFDRVRENIRKIRRTDVLDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH
INISLSQTLSRTLMTSATTIIVVVSLLLFGGPSIHSFSVALLIGIGFGTYSSIFVAIALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
YDLGLKREHMLPPKVDNDALDELP
HHHCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]