Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is yqbF
Identifier: 15673556
GI number: 15673556
Start: 1615518
End: 1616480
Strand: Reverse
Name: yqbF
Synonym: L15267
Alternate gene names: 15673556
Gene position: 1616480-1615518 (Counterclockwise)
Preceding gene: 15673558
Following gene: 15673555
Centisome position: 68.33
GC content: 36.45
Gene sequence:
>963_bases ATGAAAAAAAGGAAAAAAATGATTGCTTGGATTTTAGTAGTTTTATCCGTTGTTTTGGTCGGTGGCTATTTTGCAATAGG AAACTATTTTTATGACTTAGCTGTTAACGCGCATACCAATAAATCTTTTCTAACTGCCGGGAGCAAGCAGAAACCTCTTT CTAAAAAAGAAGAAGAAAGAAAAAAGGAAAATAAAGCATTTTTAGCGGATGTAAAATCCGACGCTTGGTATGTTACCTCC TCTGATAAGTTGAAGTTGAAACTCTATGCTGCGGATTATAAGCAACCAACTAAAACAAATAAATGGGCTATTGTTGTTCA TGGGTATGGTGGACAATCGATCGATATGGCAAGTTGGACACGTCATTTTTACAATAAGGGTTATAATGTTGTTACGCCAG ATTTAAGAGGACATGGTAAAAGTCAGGGTGATTATATCGGTATGGGCTGGGATGACCGTAAAGATATGTTGCTTTGGATT GCCAAAATTATTCAAAAAGGTCCACAGGCAGAAATTGTCCTATTAGGCGTTTCTATGGGAGGAGCAACGGTGATGAACAC TTCAGGCGAAAAGCTTCCCTCTAATGTCAAAGCAATTGTGGAAGATTGTGGATTCACATCAACAGTTGATGTTTTTGCCT ATCAATTAAAACAATTATATGGATTACCAAAATTTCCAGTTCTTTATGCGGCAAATACCGTTGTCAAAATGAGAGCTGGC TATGATATCTTTAAATCTTCAGCAATTAAACAAGTCGCCAAAAGCAAAACACCAATTTTGTTCATTCATGGTGATAAAGA TACTTTCGTTCCATTTAAGATGTTAAACCCTCTCTATGATGCAGCAAAAGTTGAGAAAGAAAAGCTGATTGTTCATGGAG CGGGTCATGGAGAATCAGAAAAAGTTAATCCAGACTTATATTGGAGCCATGTTTGGGATTTTGTTGGAAAATATATGTCT TAA
Upstream 100 bases:
>100_bases AAAACACCGTTTTTGTAAGATTATTACTAAATAATATAAGAAGTTACAAAAAAAGAAATTTTAATATTACAATGGTAAAA TAAAAATTAAAAGAAATTTT
Downstream 100 bases:
>100_bases TTGATTACAAAAAAGTCCTTTTTTAAAAGGACTTTTTATTTTTGCTAATGTATTTTTTGAAGACAATTTTTAGTTGACAT GGAGATAATTTATGATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKKRKKMIAWILVVLSVVLVGGYFAIGNYFYDLAVNAHTNKSFLTAGSKQKPLSKKEEERKKENKAFLADVKSDAWYVTS SDKLKLKLYAADYKQPTKTNKWAIVVHGYGGQSIDMASWTRHFYNKGYNVVTPDLRGHGKSQGDYIGMGWDDRKDMLLWI AKIIQKGPQAEIVLLGVSMGGATVMNTSGEKLPSNVKAIVEDCGFTSTVDVFAYQLKQLYGLPKFPVLYAANTVVKMRAG YDIFKSSAIKQVAKSKTPILFIHGDKDTFVPFKMLNPLYDAAKVEKEKLIVHGAGHGESEKVNPDLYWSHVWDFVGKYMS
Sequences:
>Translated_320_residues MKKRKKMIAWILVVLSVVLVGGYFAIGNYFYDLAVNAHTNKSFLTAGSKQKPLSKKEEERKKENKAFLADVKSDAWYVTS SDKLKLKLYAADYKQPTKTNKWAIVVHGYGGQSIDMASWTRHFYNKGYNVVTPDLRGHGKSQGDYIGMGWDDRKDMLLWI AKIIQKGPQAEIVLLGVSMGGATVMNTSGEKLPSNVKAIVEDCGFTSTVDVFAYQLKQLYGLPKFPVLYAANTVVKMRAG YDIFKSSAIKQVAKSKTPILFIHGDKDTFVPFKMLNPLYDAAKVEKEKLIVHGAGHGESEKVNPDLYWSHVWDFVGKYMS >Mature_320_residues MKKRKKMIAWILVVLSVVLVGGYFAIGNYFYDLAVNAHTNKSFLTAGSKQKPLSKKEEERKKENKAFLADVKSDAWYVTS SDKLKLKLYAADYKQPTKTNKWAIVVHGYGGQSIDMASWTRHFYNKGYNVVTPDLRGHGKSQGDYIGMGWDDRKDMLLWI AKIIQKGPQAEIVLLGVSMGGATVMNTSGEKLPSNVKAIVEDCGFTSTVDVFAYQLKQLYGLPKFPVLYAANTVVKMRAG YDIFKSSAIKQVAKSKTPILFIHGDKDTFVPFKMLNPLYDAAKVEKEKLIVHGAGHGESEKVNPDLYWSHVWDFVGKYMS
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 35901; Mature: 35901
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRKKMIAWILVVLSVVLVGGYFAIGNYFYDLAVNAHTNKSFLTAGSKQKPLSKKEEER CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEECCCCCCCCCHHHHHH KKENKAFLADVKSDAWYVTSSDKLKLKLYAADYKQPTKTNKWAIVVHGYGGQSIDMASWT HHHCCCEEEECCCCEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHH RHFYNKGYNVVTPDLRGHGKSQGDYIGMGWDDRKDMLLWIAKIIQKGPQAEIVLLGVSMG HHHHHCCCEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCC GATVMNTSGEKLPSNVKAIVEDCGFTSTVDVFAYQLKQLYGLPKFPVLYAANTVVKMRAG CCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEECC YDIFKSSAIKQVAKSKTPILFIHGDKDTFVPFKMLNPLYDAAKVEKEKLIVHGAGHGESE HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC KVNPDLYWSHVWDFVGKYMS CCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKKRKKMIAWILVVLSVVLVGGYFAIGNYFYDLAVNAHTNKSFLTAGSKQKPLSKKEEER CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEECCCCCCCCCHHHHHH KKENKAFLADVKSDAWYVTSSDKLKLKLYAADYKQPTKTNKWAIVVHGYGGQSIDMASWT HHHCCCEEEECCCCEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHH RHFYNKGYNVVTPDLRGHGKSQGDYIGMGWDDRKDMLLWIAKIIQKGPQAEIVLLGVSMG HHHHHCCCEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCC GATVMNTSGEKLPSNVKAIVEDCGFTSTVDVFAYQLKQLYGLPKFPVLYAANTVVKMRAG CCEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEECC YDIFKSSAIKQVAKSKTPILFIHGDKDTFVPFKMLNPLYDAAKVEKEKLIVHGAGHGESE HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC KVNPDLYWSHVWDFVGKYMS CCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]