Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is yqbH
Identifier: 15673558
GI number: 15673558
Start: 1617891
End: 1618202
Strand: Reverse
Name: yqbH
Synonym: L17640
Alternate gene names: NA
Gene position: 1618202-1617891 (Counterclockwise)
Preceding gene: 15673559
Following gene: 15673556
Centisome position: 68.41
GC content: 31.73
Gene sequence:
>312_bases ATGGCCGAGAATCAGCTATTCTATCCACGGTTAGAAGAATTAATAAGAATATCAAAAAAATCTTTTAATCAAGTTGAAAG AGATCTAGGATATCCTAGAAATGCGCTTCATAATTATAAAAACGGTGTGGAACCTTCGGGAATTCGATTGATTGAATTGG CACATTATTTCGGAGTAACACCTGAGTATTTGCTAGGAATAAACAATGACCCCAAAAATAATGGAACCAGAATTATTTTT GAAAGTCTTAATGATTATCAGAAAAAAGATTTATGCATTATTTGTCAAGAATGGTTGTTGTCTTCAAAATAG
Upstream 100 bases:
>100_bases TGATGAGACAGACGTTTAGGTTCTACTTAGATTTTTGAATCATGATTATTTACATTTATTAAAGTTAAGTAAAAGTAAAA CAAATTGCAGGAGGTTTTTT
Downstream 100 bases:
>100_bases AGTAAAGAGAGTATAAACTATAAATAAAAAAAGCCTTATAAGGCTTTTTTATTTATAAAAATTAATTAGAATTTAATTAT TTTTTGGGACGAACGAACAT
Product: transcription regulator
Products: NA
Alternate protein names: Transcription Regulator; Xre Family Transcriptional Regulator; Cro/CI Family Transcriptional Regulator
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MAENQLFYPRLEELIRISKKSFNQVERDLGYPRNALHNYKNGVEPSGIRLIELAHYFGVTPEYLLGINNDPKNNGTRIIF ESLNDYQKKDLCIICQEWLLSSK
Sequences:
>Translated_103_residues MAENQLFYPRLEELIRISKKSFNQVERDLGYPRNALHNYKNGVEPSGIRLIELAHYFGVTPEYLLGINNDPKNNGTRIIF ESLNDYQKKDLCIICQEWLLSSK >Mature_102_residues AENQLFYPRLEELIRISKKSFNQVERDLGYPRNALHNYKNGVEPSGIRLIELAHYFGVTPEYLLGINNDPKNNGTRIIFE SLNDYQKKDLCIICQEWLLSSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12047; Mature: 11916
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS50943 HTH_CROC1 ; PS00697 DNA_LIGASE_A1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENQLFYPRLEELIRISKKSFNQVERDLGYPRNALHNYKNGVEPSGIRLIELAHYFGVT CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCC PEYLLGINNDPKNNGTRIIFESLNDYQKKDLCIICQEWLLSSK HHHEEECCCCCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AENQLFYPRLEELIRISKKSFNQVERDLGYPRNALHNYKNGVEPSGIRLIELAHYFGVT CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCC PEYLLGINNDPKNNGTRIIFESLNDYQKKDLCIICQEWLLSSK HHHEEECCCCCCCCCCEEEHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA