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The map label for this gene is ypdC

Identifier: 15673481

GI number: 15673481

Start: 1533668

End: 1534963

Strand: Reverse

Name: ypdC

Synonym: L133416

Alternate gene names: NA

Gene position: 1534963-1533668 (Counterclockwise)

Preceding gene: 15673484

Following gene: 15673480

Centisome position: 64.89

GC content: 34.57

Gene sequence:

>1296_bases
GTGAAAGCAAATATTCCAAAATCTGTTAAAAAGTTTATGAATGACATAACAATTCTTTGTGGAGAAGAACATAAAGAGTG
GGCTGTAAACTTTAATCATTCTTTCTCAAACACACTTGAAACTACTTTAAGAGTGCATGATGACAGGACTACCTTTCTTT
TAACAGGTGATATTCCAGCAATGTGGTTACGAGATTCGACAGCTCAAATGAGACCTTATTTGGTACTTGCACGTGAAGAT
GAAGAAATTCGTGATTTGATTGTTGGTTTAGTAAAAAAACAAATGATATATATTAATCTAGATCCTTATGCTAATGCTTT
CAACGAAAGTGAAAACTTTGCTGGGCATCAGACAGACCATACCAACTTTAATGAACACAAAGGCTGGATTTGGGAAAGGA
AGTATGAGATTGACTCCCTTTGTTATCCTATTCAACTCGCTTACTTAGTCTATAAAAACACAGGTTATACCAAACATTTT
GATGAAGAATTTATCAAAGCAGTCAAAAACACCTTGAATGTTTTTAAAACAGAACAAAATCATGAGGATTCTCCCTACCA
TTTTGTTCGAGATACTGAGCGACATGAAGATACTTTAATAAGAGATGGAAAAGGAGCCAAGACAGCCTACACTGGGATGA
CTTGGTCAGGATTTAGACCAAGTGATGATGCTTGTGAGTATGGTTATTTGGTTCCGTCAAATATGTTTGCTGTTGTTATT
TTGGATTATATCAAGGAAATTTTTACTGAGCTTCTATCTAATGAAGAAATTGCAAATGAAGCAAAGATTCTTAGAGATGA
AATTCAAGAGGGACTTGAGAAATTTGCCAAAACTAAAAATCAACAAGGCGAAGAAGTTTGGGCTTATGATGTTGATGGAC
TTGGGAACAAAACTTTAATGGATGATAGCAATGTTCCCAATCTGATTGCAGCTCCATATTTGGGATTTTGTCAGGCTGAA
GATGAAGTTTATTTGAAAACACGACAAACTTTATTGAGTAAAGAAAATCCTTATTACTATGAAGGAAAATATGCACGAGG
AATTGGTTCTAGTCATACACCAGAAAATTATGTCTGGCCAATTGCTTTAGCAATGGAAGGAATGACTACAAATGATAAGA
GCGAAAAAGAACGAATCTTAAATCATTTGGTCGAAACAGACGCTGGAACACATTTGATGCATGAAGGATTTGATGTCAAT
AATCCACAAAATTACACTAGAGAATGGTTTAGCTGGGCTAATATGATGTTTTGTGAGTTAGTCATGGATTATTTTGATAT
CCGAATTGAAAAATAA

Upstream 100 bases:

>100_bases
CAATTAATCTTATTTTAATAAAAAAGCGCTTGCAAAATATAAAAATTTATATTAAAATAACCTTAAATGATATATCAAAT
AAATTTTAAAAGGAGATGCA

Downstream 100 bases:

>100_bases
GTTAATGAGATTAGTTTTAGAAAGATAGAGCTTTATGAAAAAGAAAACGGTACATATCATCTCTCACAGTCATTGGGATC
GAGAATGGTATATGGCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKANIPKSVKKFMNDITILCGEEHKEWAVNFNHSFSNTLETTLRVHDDRTTFLLTGDIPAMWLRDSTAQMRPYLVLARED
EEIRDLIVGLVKKQMIYINLDPYANAFNESENFAGHQTDHTNFNEHKGWIWERKYEIDSLCYPIQLAYLVYKNTGYTKHF
DEEFIKAVKNTLNVFKTEQNHEDSPYHFVRDTERHEDTLIRDGKGAKTAYTGMTWSGFRPSDDACEYGYLVPSNMFAVVI
LDYIKEIFTELLSNEEIANEAKILRDEIQEGLEKFAKTKNQQGEEVWAYDVDGLGNKTLMDDSNVPNLIAAPYLGFCQAE
DEVYLKTRQTLLSKENPYYYEGKYARGIGSSHTPENYVWPIALAMEGMTTNDKSEKERILNHLVETDAGTHLMHEGFDVN
NPQNYTREWFSWANMMFCELVMDYFDIRIEK

Sequences:

>Translated_431_residues
MKANIPKSVKKFMNDITILCGEEHKEWAVNFNHSFSNTLETTLRVHDDRTTFLLTGDIPAMWLRDSTAQMRPYLVLARED
EEIRDLIVGLVKKQMIYINLDPYANAFNESENFAGHQTDHTNFNEHKGWIWERKYEIDSLCYPIQLAYLVYKNTGYTKHF
DEEFIKAVKNTLNVFKTEQNHEDSPYHFVRDTERHEDTLIRDGKGAKTAYTGMTWSGFRPSDDACEYGYLVPSNMFAVVI
LDYIKEIFTELLSNEEIANEAKILRDEIQEGLEKFAKTKNQQGEEVWAYDVDGLGNKTLMDDSNVPNLIAAPYLGFCQAE
DEVYLKTRQTLLSKENPYYYEGKYARGIGSSHTPENYVWPIALAMEGMTTNDKSEKERILNHLVETDAGTHLMHEGFDVN
NPQNYTREWFSWANMMFCELVMDYFDIRIEK
>Mature_431_residues
MKANIPKSVKKFMNDITILCGEEHKEWAVNFNHSFSNTLETTLRVHDDRTTFLLTGDIPAMWLRDSTAQMRPYLVLARED
EEIRDLIVGLVKKQMIYINLDPYANAFNESENFAGHQTDHTNFNEHKGWIWERKYEIDSLCYPIQLAYLVYKNTGYTKHF
DEEFIKAVKNTLNVFKTEQNHEDSPYHFVRDTERHEDTLIRDGKGAKTAYTGMTWSGFRPSDDACEYGYLVPSNMFAVVI
LDYIKEIFTELLSNEEIANEAKILRDEIQEGLEKFAKTKNQQGEEVWAYDVDGLGNKTLMDDSNVPNLIAAPYLGFCQAE
DEVYLKTRQTLLSKENPYYYEGKYARGIGSSHTPENYVWPIALAMEGMTTNDKSEKERILNHLVETDAGTHLMHEGFDVN
NPQNYTREWFSWANMMFCELVMDYFDIRIEK

Specific function: Unknown

COG id: COG3538

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50235; Mature: 50235

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANIPKSVKKFMNDITILCGEEHKEWAVNFNHSFSNTLETTLRVHDDRTTFLLTGDIPA
CCCCCHHHHHHHHHCEEEEECCCCCCEEEECCCCHHHHHHHHEEEECCCEEEEEECCCCE
MWLRDSTAQMRPYLVLAREDEEIRDLIVGLVKKQMIYINLDPYANAFNESENFAGHQTDH
EEECCCCCCCCCEEEEECCCHHHHHHHHHHHHCEEEEEEECHHHHHCCCCCCCCCCCCCC
TNFNEHKGWIWERKYEIDSLCYPIQLAYLVYKNTGYTKHFDEEFIKAVKNTLNVFKTEQN
CCCCCCCCCEEEEECCHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC
HEDSPYHFVRDTERHEDTLIRDGKGAKTAYTGMTWSGFRPSDDACEYGYLVPSNMFAVVI
CCCCCEEECCCCCCHHHHHEECCCCCCEEECCCEECCCCCCCCCCCCCEECCCHHHHHHH
LDYIKEIFTELLSNEEIANEAKILRDEIQEGLEKFAKTKNQQGEEVWAYDVDGLGNKTLM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEC
DDSNVPNLIAAPYLGFCQAEDEVYLKTRQTLLSKENPYYYEGKYARGIGSSHTPENYVWP
CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCEECCCCCCCCCCCCEEE
IALAMEGMTTNDKSEKERILNHLVETDAGTHLMHEGFDVNNPQNYTREWFSWANMMFCEL
EEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VMDYFDIRIEK
HHHHHHHEECC
>Mature Secondary Structure
MKANIPKSVKKFMNDITILCGEEHKEWAVNFNHSFSNTLETTLRVHDDRTTFLLTGDIPA
CCCCCHHHHHHHHHCEEEEECCCCCCEEEECCCCHHHHHHHHEEEECCCEEEEEECCCCE
MWLRDSTAQMRPYLVLAREDEEIRDLIVGLVKKQMIYINLDPYANAFNESENFAGHQTDH
EEECCCCCCCCCEEEEECCCHHHHHHHHHHHHCEEEEEEECHHHHHCCCCCCCCCCCCCC
TNFNEHKGWIWERKYEIDSLCYPIQLAYLVYKNTGYTKHFDEEFIKAVKNTLNVFKTEQN
CCCCCCCCCEEEEECCHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC
HEDSPYHFVRDTERHEDTLIRDGKGAKTAYTGMTWSGFRPSDDACEYGYLVPSNMFAVVI
CCCCCEEECCCCCCHHHHHEECCCCCCEEECCCEECCCCCCCCCCCCCEECCCHHHHHHH
LDYIKEIFTELLSNEEIANEAKILRDEIQEGLEKFAKTKNQQGEEVWAYDVDGLGNKTLM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEC
DDSNVPNLIAAPYLGFCQAEDEVYLKTRQTLLSKENPYYYEGKYARGIGSSHTPENYVWP
CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCEECCCCCCCCCCCCEEE
IALAMEGMTTNDKSEKERILNHLVETDAGTHLMHEGFDVNNPQNYTREWFSWANMMFCEL
EEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VMDYFDIRIEK
HHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA