Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is ptk
Identifier: 15673484
GI number: 15673484
Start: 1538482
End: 1540950
Strand: Reverse
Name: ptk
Synonym: L138230
Alternate gene names: NA
Gene position: 1540950-1538482 (Counterclockwise)
Preceding gene: 15673485
Following gene: 15673481
Centisome position: 65.14
GC content: 38.84
Gene sequence:
>2469_bases ATGACAGAATATAATTCAGAAGCTTATTTGAAAAAGCTTGATAAATGGTGGCGAGCAGCAACTTATCTTGGAGCAGGAAT GATCTTCTTGAAAGAAAATCCATTGTTCTCTGTGACAGGTACTCCAATTAAAGCGGAAAACCTTAAAGCCAATCCTATTG GGCACTGGGGGACGGTTTCAGGACAAACTTTCCTCTATGCTCATGCTAATCGTCTAATCAATAAATATGATCAAAAGATG TTTTACATGGGTGGCCCCGGACATGGTGGACAAGCTATGGTTGTTCCTTCTTATCTTGATGGCTCATATACAGAAGCTTA TCCAGAGATTACCCAAGATTTGGAAGGAATGTCACGTTTGTTTAAACGTTTCTCATTTCCTGGAGGAATAGGGTCGCATA TGACAGCACAAACCCCTGGTTCACTTCATGAAGGAGGTGAGTTGGGTTATGTGCTATCACATGCAACAGGGGCTATTCTT GATCAACCTGAACAGATTGCTTTTGCTGTTGTTGGGGATGGAGAAGCTGAAACTGGACCGTTGATGACAAGTTGGCACTC TATTAAATTCATTAATCCTAAGAATGATGGGGCGATTTTACCAATTCTTGATTTAAATGGTTTTAAAATTTCAAATCCTA CTTTGTTCGCTCGAACTTCAGATGTTGATATTCGTAAATTCTTTGAAGGACTGGGTTACTCACCTCGTTATATTGAAAAT GATGATATTCATGATTACATGGCTTATCATAAATTAGCAGCTGAAGTTTTTGATAAAGCGATTGAAGACATTCATCAAAT TCAGAAAGATGCGCGTGAAGATAATCGTTATCAAAATGGAGAGATTCCAGCTTGGCCAATTGTTATCGCACGTTTACCAA AAGGTTGGGGTGGTCCACGTTATAATGATTGGTCAGGTCCTAAATTTGACGGTAAGGGAATGCCAATTGAACATAGTTTC CGTGCGCATCAAGTTCCACTTCCGTTATCTTCTAAAAATATGGGAACTTTACCAGAATTTGTAAAATGGATGACTTCTTA CCAACCAGAAACTTTATTTAATGCTGATGGAAGTTTGAAAGAAGAGTTGCGTGATTTTGCACCAAAAGGTGAGATGCGAA TGGCTTCAAACCCTGTAACAAATGGGGGAGTTGATTCTTCTAATTTGGTTTTACCAGATTGGCAAGAATTTGCAAATCCA ATTTCTGAAAATAATCGAGGGAAATTACTCCCTGATACAAATGACAATATGGATATGAATGTTTTGTCAAAATATTTTGC TGAAATAGTCAAACTTAATCCTACGCGTTTCCGTTTGTTTGGTCCTGATGAAACCATGTCTAATCGTTTTTGGGAAATGT TTAAGGTGACGAATCGTCAGTGGATGCAAGTCATAAAAAATCCAAATGATGAATTTATCTCACCTGAGGGTCGCATTATT GATTCTCAATTATCAGAACACCAAGCAGAAGGTTGGCTTGAAGGTTATACTTTAACCGGACGCACAGGAGCATTTGCAAG TTATGAATCATTCTTGCGAGTCGTAGATTCAATGTTAACTCAACATTTCAAATGGATTCGTCAAGCTGCAGACCAAAAAT GGCGCCATGATTATCCTTCGCTTAATGTTATTTCGACCTCAACCGTTTTCCAACAAGACCATAATGGTTATACTCACCAA GATCCTGGAATGTTGACTCATTTGGCTGAAAAGAAATCTGATTTTATCAGACAATACTTGCCGGCTGATGGGAATACTTT GCTTGCCGTATTTGACCGTGCTTTTCAAGATAGAAGTAAAATTAATCATATTGTAGCCTCTAAACAACCTCGTCAACAAT GGTTTACTAAAGAAGAAGCTGAAAAATTGGCGACTGACGGAATTGCAACAATTGATTGGGCTTCAACGGCTAAAGATGGA GAAGCAGTAGATTTAGTTTTTGCCTCAGCAGGAGCTGAGCCTACAATTGAAACACTGGCAGCTTTACATCTTGTAAACGA AGTTTTCCCACAGGCAAAATTCCGTTATGTGAACGTGGTTGAATTGGGTCGGTTGCAAAAGAAAAAGGGAGCACTCAATC AAGAACGTGAACTCTCAGATGAAGAATTTGAAAAATACTTTGGCCCTTCAGGCACTCCAGTAATTTTTGGATTCCATGGA TATGAAGATTTAATCGAATCCATTTTCTATCAAAGAGGACATGATGGTTTGATTGTTCATGGTTACCGTGAAGATGGTGA CATCACGACGACTTATGATATGCGGGTTTACTCTGAGCTTGACCGTTTCCACCAAGCGATTGATGCCATGCAAGTTCTAT ATGTCAACCGAAAAGTTAATCAAGGTCTAGCGAAAGCTTTCATTGACCGAATGAAACGGACACTAGTTAAACACTTTGAA GTGACAAGAAATGAAGGAGTTGATATTCCTGATTTTACTGAATGGGTTTGGTCGGATTTAAAGAAATAG
Upstream 100 bases:
>100_bases TTTAGAAAAAGAGTAGCAATGTTTCCTAGTGGATATATGAACAAATTATTAGAATATCAAGCATAATTGACCTATAATGA AAGAAAATCAGGAGGAAAAA
Downstream 100 bases:
>100_bases GCTTAAATTTATAAAATAAAAAAACACGCTGATTTTAATCAATCAAGCGTGTTTTTTTACTGACAGAATGATTATATCTG GTCTGTCAGTAATTAATTTT
Product: putative phosphoketolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 822; Mature: 821
Protein sequence:
>822_residues MTEYNSEAYLKKLDKWWRAATYLGAGMIFLKENPLFSVTGTPIKAENLKANPIGHWGTVSGQTFLYAHANRLINKYDQKM FYMGGPGHGGQAMVVPSYLDGSYTEAYPEITQDLEGMSRLFKRFSFPGGIGSHMTAQTPGSLHEGGELGYVLSHATGAIL DQPEQIAFAVVGDGEAETGPLMTSWHSIKFINPKNDGAILPILDLNGFKISNPTLFARTSDVDIRKFFEGLGYSPRYIEN DDIHDYMAYHKLAAEVFDKAIEDIHQIQKDAREDNRYQNGEIPAWPIVIARLPKGWGGPRYNDWSGPKFDGKGMPIEHSF RAHQVPLPLSSKNMGTLPEFVKWMTSYQPETLFNADGSLKEELRDFAPKGEMRMASNPVTNGGVDSSNLVLPDWQEFANP ISENNRGKLLPDTNDNMDMNVLSKYFAEIVKLNPTRFRLFGPDETMSNRFWEMFKVTNRQWMQVIKNPNDEFISPEGRII DSQLSEHQAEGWLEGYTLTGRTGAFASYESFLRVVDSMLTQHFKWIRQAADQKWRHDYPSLNVISTSTVFQQDHNGYTHQ DPGMLTHLAEKKSDFIRQYLPADGNTLLAVFDRAFQDRSKINHIVASKQPRQQWFTKEEAEKLATDGIATIDWASTAKDG EAVDLVFASAGAEPTIETLAALHLVNEVFPQAKFRYVNVVELGRLQKKKGALNQERELSDEEFEKYFGPSGTPVIFGFHG YEDLIESIFYQRGHDGLIVHGYREDGDITTTYDMRVYSELDRFHQAIDAMQVLYVNRKVNQGLAKAFIDRMKRTLVKHFE VTRNEGVDIPDFTEWVWSDLKK
Sequences:
>Translated_822_residues MTEYNSEAYLKKLDKWWRAATYLGAGMIFLKENPLFSVTGTPIKAENLKANPIGHWGTVSGQTFLYAHANRLINKYDQKM FYMGGPGHGGQAMVVPSYLDGSYTEAYPEITQDLEGMSRLFKRFSFPGGIGSHMTAQTPGSLHEGGELGYVLSHATGAIL DQPEQIAFAVVGDGEAETGPLMTSWHSIKFINPKNDGAILPILDLNGFKISNPTLFARTSDVDIRKFFEGLGYSPRYIEN DDIHDYMAYHKLAAEVFDKAIEDIHQIQKDAREDNRYQNGEIPAWPIVIARLPKGWGGPRYNDWSGPKFDGKGMPIEHSF RAHQVPLPLSSKNMGTLPEFVKWMTSYQPETLFNADGSLKEELRDFAPKGEMRMASNPVTNGGVDSSNLVLPDWQEFANP ISENNRGKLLPDTNDNMDMNVLSKYFAEIVKLNPTRFRLFGPDETMSNRFWEMFKVTNRQWMQVIKNPNDEFISPEGRII DSQLSEHQAEGWLEGYTLTGRTGAFASYESFLRVVDSMLTQHFKWIRQAADQKWRHDYPSLNVISTSTVFQQDHNGYTHQ DPGMLTHLAEKKSDFIRQYLPADGNTLLAVFDRAFQDRSKINHIVASKQPRQQWFTKEEAEKLATDGIATIDWASTAKDG EAVDLVFASAGAEPTIETLAALHLVNEVFPQAKFRYVNVVELGRLQKKKGALNQERELSDEEFEKYFGPSGTPVIFGFHG YEDLIESIFYQRGHDGLIVHGYREDGDITTTYDMRVYSELDRFHQAIDAMQVLYVNRKVNQGLAKAFIDRMKRTLVKHFE VTRNEGVDIPDFTEWVWSDLKK >Mature_821_residues TEYNSEAYLKKLDKWWRAATYLGAGMIFLKENPLFSVTGTPIKAENLKANPIGHWGTVSGQTFLYAHANRLINKYDQKMF YMGGPGHGGQAMVVPSYLDGSYTEAYPEITQDLEGMSRLFKRFSFPGGIGSHMTAQTPGSLHEGGELGYVLSHATGAILD QPEQIAFAVVGDGEAETGPLMTSWHSIKFINPKNDGAILPILDLNGFKISNPTLFARTSDVDIRKFFEGLGYSPRYIEND DIHDYMAYHKLAAEVFDKAIEDIHQIQKDAREDNRYQNGEIPAWPIVIARLPKGWGGPRYNDWSGPKFDGKGMPIEHSFR AHQVPLPLSSKNMGTLPEFVKWMTSYQPETLFNADGSLKEELRDFAPKGEMRMASNPVTNGGVDSSNLVLPDWQEFANPI SENNRGKLLPDTNDNMDMNVLSKYFAEIVKLNPTRFRLFGPDETMSNRFWEMFKVTNRQWMQVIKNPNDEFISPEGRIID SQLSEHQAEGWLEGYTLTGRTGAFASYESFLRVVDSMLTQHFKWIRQAADQKWRHDYPSLNVISTSTVFQQDHNGYTHQD PGMLTHLAEKKSDFIRQYLPADGNTLLAVFDRAFQDRSKINHIVASKQPRQQWFTKEEAEKLATDGIATIDWASTAKDGE AVDLVFASAGAEPTIETLAALHLVNEVFPQAKFRYVNVVELGRLQKKKGALNQERELSDEEFEKYFGPSGTPVIFGFHGY EDLIESIFYQRGHDGLIVHGYREDGDITTTYDMRVYSELDRFHQAIDAMQVLYVNRKVNQGLAKAFIDRMKRTLVKHFEV TRNEGVDIPDFTEWVWSDLKK
Specific function: Unknown
COG id: COG3957
COG function: function code G; Phosphoketolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the XFP family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHK_LACLA (Q9CFH4)
Other databases:
- EMBL: AE005176 - PIR: F86812 - RefSeq: NP_267658.1 - ProteinModelPortal: Q9CFH4 - GeneID: 1115159 - GenomeReviews: AE005176_GR - KEGG: lla:L138230 - NMPDR: fig|272623.1.peg.1543 - HOGENOM: HBG285855 - OMA: RGYGHTP - ProtClustDB: PRK05261 - BioCyc: LLAC272623:L138230-MONOMER - HAMAP: MF_01403 - InterPro: IPR005593 - InterPro: IPR018969 - InterPro: IPR019790 - InterPro: IPR018970 - InterPro: IPR019789 - PIRSF: PIRSF017245
Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N
EC number: NA
Molecular weight: Translated: 93364; Mature: 93233
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS60002 PHOSPHOKETOLASE_1; PS60003 PHOSPHOKETOLASE_2; PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYNSEAYLKKLDKWWRAATYLGAGMIFLKENPLFSVTGTPIKAENLKANPIGHWGTVS CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCC GQTFLYAHANRLINKYDQKMFYMGGPGHGGQAMVVPSYLDGSYTEAYPEITQDLEGMSRL CCEEEHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH FKRFSFPGGIGSHMTAQTPGSLHEGGELGYVLSHATGAILDQPEQIAFAVVGDGEAETGP HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCHHHCCCCCEEEEEEECCCCCCCC LMTSWHSIKFINPKNDGAILPILDLNGFKISNPTLFARTSDVDIRKFFEGLGYSPRYIEN CEECCCEEEEECCCCCCCEEEEEECCCEEECCCEEEEECCCCHHHHHHHHCCCCCCCCCC DDIHDYMAYHKLAAEVFDKAIEDIHQIQKDAREDNRYQNGEIPAWPIVIARLPKGWGGPR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCC YNDWSGPKFDGKGMPIEHSFRAHQVPLPLSSKNMGTLPEFVKWMTSYQPETLFNADGSLK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCHH EELRDFAPKGEMRMASNPVTNGGVDSSNLVLPDWQEFANPISENNRGKLLPDTNDNMDMN HHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHH VLSKYFAEIVKLNPTRFRLFGPDETMSNRFWEMFKVTNRQWMQVIKNPNDEFISPEGRII HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE DSQLSEHQAEGWLEGYTLTGRTGAFASYESFLRVVDSMLTQHFKWIRQAADQKWRHDYPS HHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LNVISTSTVFQQDHNGYTHQDPGMLTHLAEKKSDFIRQYLPADGNTLLAVFDRAFQDRSK CEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH INHIVASKQPRQQWFTKEEAEKLATDGIATIDWASTAKDGEAVDLVFASAGAEPTIETLA HHHHHCCCCHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHH ALHLVNEVFPQAKFRYVNVVELGRLQKKKGALNQERELSDEEFEKYFGPSGTPVIFGFHG HHHHHHHHCCCHHEEEEEHHHHHHHHHHHCCCCCHHCCCHHHHHHHHCCCCCEEEEEECC YEDLIESIFYQRGHDGLIVHGYREDGDITTTYDMRVYSELDRFHQAIDAMQVLYVNRKVN HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLAKAFIDRMKRTLVKHFEVTRNEGVDIPDFTEWVWSDLKK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TEYNSEAYLKKLDKWWRAATYLGAGMIFLKENPLFSVTGTPIKAENLKANPIGHWGTVS CCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCC GQTFLYAHANRLINKYDQKMFYMGGPGHGGQAMVVPSYLDGSYTEAYPEITQDLEGMSRL CCEEEHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH FKRFSFPGGIGSHMTAQTPGSLHEGGELGYVLSHATGAILDQPEQIAFAVVGDGEAETGP HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCHHHCCCCCEEEEEEECCCCCCCC LMTSWHSIKFINPKNDGAILPILDLNGFKISNPTLFARTSDVDIRKFFEGLGYSPRYIEN CEECCCEEEEECCCCCCCEEEEEECCCEEECCCEEEEECCCCHHHHHHHHCCCCCCCCCC DDIHDYMAYHKLAAEVFDKAIEDIHQIQKDAREDNRYQNGEIPAWPIVIARLPKGWGGPR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCC YNDWSGPKFDGKGMPIEHSFRAHQVPLPLSSKNMGTLPEFVKWMTSYQPETLFNADGSLK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCHH EELRDFAPKGEMRMASNPVTNGGVDSSNLVLPDWQEFANPISENNRGKLLPDTNDNMDMN HHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHH VLSKYFAEIVKLNPTRFRLFGPDETMSNRFWEMFKVTNRQWMQVIKNPNDEFISPEGRII HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE DSQLSEHQAEGWLEGYTLTGRTGAFASYESFLRVVDSMLTQHFKWIRQAADQKWRHDYPS HHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LNVISTSTVFQQDHNGYTHQDPGMLTHLAEKKSDFIRQYLPADGNTLLAVFDRAFQDRSK CEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHH INHIVASKQPRQQWFTKEEAEKLATDGIATIDWASTAKDGEAVDLVFASAGAEPTIETLA HHHHHCCCCHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCHHHHHHH ALHLVNEVFPQAKFRYVNVVELGRLQKKKGALNQERELSDEEFEKYFGPSGTPVIFGFHG HHHHHHHHCCCHHEEEEEHHHHHHHHHHHCCCCCHHCCCHHHHHHHHCCCCCEEEEEECC YEDLIESIFYQRGHDGLIVHGYREDGDITTTYDMRVYSELDRFHQAIDAMQVLYVNRKVN HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLAKAFIDRMKRTLVKHFEVTRNEGVDIPDFTEWVWSDLKK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11337471