Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

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The map label for this gene is ydhD

Identifier: 15672351

GI number: 15672351

Start: 373134

End: 373424

Strand: Direct

Name: ydhD

Synonym: L173048

Alternate gene names: 15672351

Gene position: 373134-373424 (Clockwise)

Preceding gene: 15672350

Following gene: 15672352

Centisome position: 15.77

GC content: 37.46

Gene sequence:

>291_bases
ATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGA
AGTCAGCCAAGAGCTTGAGGTTCATGCCAATAGTCTTTATCGCTGGGTTCAAGAAGTTGAAGAATATGGAGAAAGTGCTT
TTCCAGGCAATGGGACAGCCCTAGCTGATGCCCAACATAAGATTAAATTATTAGAGAAAGAAAATCGTTATCTTAAGGAG
GAACTTGAACTTCTAAAAAAGTTCCGGGTCTTCTTGAAGCGAAGCAAGTAA

Upstream 100 bases:

>100_bases
GTAGTGACCCCCAAAATATAGACTTTTCAAATCTATATTTCGGTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAG
AAATCGTGGAAAGGTTTATT

Downstream 100 bases:

>100_bases
AACGTTTTGAATTTCTCTTGAAACATCATGGGAAGATAAAAATTAAGCATGCAGTAAAAGTTCTTAAGGTTTCTCGCTCA
GGTTTCTATGAATACATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase AB Of IS

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLKE
ELELLKKFRVFLKRSK

Sequences:

>Translated_96_residues
MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLKE
ELELLKKFRVFLKRSK
>Mature_95_residues
ARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLKEE
LELLKKFRVFLKRSK

Specific function: Involved in the transposition of the insertion sequence is911 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11333; Mature: 11202

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTA
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LADAQHKIKLLEKENRYLKEELELLKKFRVFLKRSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTA
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LADAQHKIKLLEKENRYLKEELELLKKFRVFLKRSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA