Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is ydhD
Identifier: 15672351
GI number: 15672351
Start: 373134
End: 373424
Strand: Direct
Name: ydhD
Synonym: L173048
Alternate gene names: 15672351
Gene position: 373134-373424 (Clockwise)
Preceding gene: 15672350
Following gene: 15672352
Centisome position: 15.77
GC content: 37.46
Gene sequence:
>291_bases ATGGCAAGAAGAAAATTCGATAAACAATTTAAAAATTCTGCAGTAAAACTCATTCTTGAAGAGGGTTACTCTGTTAAAGA AGTCAGCCAAGAGCTTGAGGTTCATGCCAATAGTCTTTATCGCTGGGTTCAAGAAGTTGAAGAATATGGAGAAAGTGCTT TTCCAGGCAATGGGACAGCCCTAGCTGATGCCCAACATAAGATTAAATTATTAGAGAAAGAAAATCGTTATCTTAAGGAG GAACTTGAACTTCTAAAAAAGTTCCGGGTCTTCTTGAAGCGAAGCAAGTAA
Upstream 100 bases:
>100_bases GTAGTGACCCCCAAAATATAGACTTTTCAAATCTATATTTCGGTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAG AAATCGTGGAAAGGTTTATT
Downstream 100 bases:
>100_bases AACGTTTTGAATTTCTCTTGAAACATCATGGGAAGATAAAAATTAAGCATGCAGTAAAAGTTCTTAAGGTTTCTCGCTCA GGTTTCTATGAATACATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase AB Of IS
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLKE ELELLKKFRVFLKRSK
Sequences:
>Translated_96_residues MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLKE ELELLKKFRVFLKRSK >Mature_95_residues ARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTALADAQHKIKLLEKENRYLKEE LELLKKFRVFLKRSK
Specific function: Involved in the transposition of the insertion sequence is911 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11333; Mature: 11202
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTA CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LADAQHKIKLLEKENRYLKEELELLKKFRVFLKRSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTA CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LADAQHKIKLLEKENRYLKEELELLKKFRVFLKRSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA