Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ydbH
Identifier: 15672299
GI number: 15672299
Start: 316202
End: 316777
Strand: Reverse
Name: ydbH
Synonym: L116212
Alternate gene names: NA
Gene position: 316777-316202 (Counterclockwise)
Preceding gene: 15672314
Following gene: 15672298
Centisome position: 13.39
GC content: 39.06
Gene sequence:
>576_bases TTGTGCGCATCAAAAAGGAGTTTTTTTATGTCTAATTCTAAGTTCAATGTCCGTTTATTAACGGAAATTGCCTTCATGGC GGCACTCGCCTTCATCATCAGCCTTATTCCAAATACTGTTTATGGCTGGATTATTGTTGAAATCGCCTGTATCCCAATTC TTATTCTCAGTTTTCGTCGCGGCCTAACAGCTGGACTTGTTGGTGGATTAATCTGGGGAATTCTGTCAATGATTACTGGA CACGCTTATATTTTAACCTTGTCTCAAGCTTTTCTTGAATATCTCATCGCCCCTGTTTCACTTGGAATTGCTGGACTTTT CCGCCAAAAAACAGCCTCTCTAAAACTTGTACCAGTTCTTTTGGGAACTTTTGTTGCTGTTCTTCTTAAATACTTCTTCC ATTTTATTGCCGGAATCATTTTCTGGAGCCAATACGCTTGGAAAGGCTGGGGAGCCGTGGCTTATTCTCTTGCTGTCAAT GGAATCAGTGCAATTTTGACTGCTATTGCTGCATTTGTCATTTTGATCATTTTCGTCAAAAAATTCCCTAAACTTTTCAT TTATAGCAATTACTAA
Upstream 100 bases:
>100_bases TTGACAAAACTGTCAGTAGCGAGAAATACCATCTGACCTGATCTGGGTAATGCCAGCGTAGGAATGTGTTAAGACAAATG TCTAATTTCTAACCCTCCTT
Downstream 100 bases:
>100_bases TAAAATCTGTCAGTAAAATTATTTTATCTTGTCAGTCAGCACAAATTCTTCTATAATAAAGCTATGTCTAAAAAGCAAAA ATTAAAGAAAACACTTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: Thiamine Transporter; Integral Membrane Protein; Proton-Coupled Thiamine Transporter
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MCASKRSFFMSNSKFNVRLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILILSFRRGLTAGLVGGLIWGILSMITG HAYILTLSQAFLEYLIAPVSLGIAGLFRQKTASLKLVPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVN GISAILTAIAAFVILIIFVKKFPKLFIYSNY
Sequences:
>Translated_191_residues MCASKRSFFMSNSKFNVRLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILILSFRRGLTAGLVGGLIWGILSMITG HAYILTLSQAFLEYLIAPVSLGIAGLFRQKTASLKLVPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVN GISAILTAIAAFVILIIFVKKFPKLFIYSNY >Mature_191_residues MCASKRSFFMSNSKFNVRLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILILSFRRGLTAGLVGGLIWGILSMITG HAYILTLSQAFLEYLIAPVSLGIAGLFRQKTASLKLVPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVN GISAILTAIAAFVILIIFVKKFPKLFIYSNY
Specific function: Unknown
COG id: COG3859
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21088; Mature: 21088
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCASKRSFFMSNSKFNVRLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILILSFRR CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLTAGLVGGLIWGILSMITGHAYILTLSQAFLEYLIAPVSLGIAGLFRQKTASLKLVPVL CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVNGISAILTAIAAFVILIIFVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFPKLFIYSNY HCCHHEEECCC >Mature Secondary Structure MCASKRSFFMSNSKFNVRLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILILSFRR CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLTAGLVGGLIWGILSMITGHAYILTLSQAFLEYLIAPVSLGIAGLFRQKTASLKLVPVL CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVNGISAILTAIAAFVILIIFVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFPKLFIYSNY HCCHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA